Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 AC099343.3-201ENST00000605834 2503 ntBASIC21.98■■□□□ 1.11
RFX7Q2KHR2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 AC233702.3-201ENST00000578656 1387 ntBASIC21.98■■□□□ 1.11
RFX7Q2KHR2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 RN7SL606P-201ENST00000472779 293 ntBASIC21.98■■□□□ 1.11
RFX7Q2KHR2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 AP000867.3-201ENST00000524675 377 ntBASIC21.98■■□□□ 1.11
RFX7Q2KHR2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 AC090616.6-201ENST00000582640 721 ntBASIC21.98■■□□□ 1.11
RFX7Q2KHR2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFX7Q2KHR2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 FAAHP1-202ENST00000446499 1238 ntBASIC21.97■■□□□ 1.11
RFX7Q2KHR2 KRT17P6-201ENST00000453795 1220 ntBASIC21.97■■□□□ 1.11
RFX7Q2KHR2 AP005901.3-202ENST00000581653 237 ntBASIC21.97■■□□□ 1.11
RFX7Q2KHR2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.97■■□□□ 1.11
RFX7Q2KHR2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 AL390961.4-201ENST00000623958 2535 ntBASIC21.96■■□□□ 1.11
RFX7Q2KHR2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 NEFHP1-201ENST00000412845 2629 ntBASIC21.96■■□□□ 1.11
RFX7Q2KHR2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.96■■□□□ 1.11
RFX7Q2KHR2 FLJ13224-201ENST00000313737 1514 ntBASIC21.96■■□□□ 1.11
RFX7Q2KHR2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 AC132938.6-201ENST00000623828 1655 ntBASIC21.95■■□□□ 1.1
RFX7Q2KHR2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 AC004870.1-201ENST00000315132 882 ntBASIC21.95■■□□□ 1.1
RFX7Q2KHR2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.95■■□□□ 1.1
RFX7Q2KHR2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFX7Q2KHR2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms