Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.62■□□□□ 0.25
CXCR4P61073 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
CXCR4P61073 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CXCR4P61073 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.62■□□□□ 0.25
CXCR4P61073 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CXCR4P61073 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CXCR4P61073 KRT8P11-201ENST00000409686 1436 ntBASIC16.62■□□□□ 0.25
CXCR4P61073 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CXCR4P61073 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.61■□□□□ 0.25
CXCR4P61073 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.61■□□□□ 0.25
CXCR4P61073 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CXCR4P61073 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CXCR4P61073 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.61■□□□□ 0.25
CXCR4P61073 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.61■□□□□ 0.25
CXCR4P61073 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.61■□□□□ 0.25
CXCR4P61073 AC069544.1-201ENST00000609399 999 ntBASIC16.61■□□□□ 0.25
CXCR4P61073 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CXCR4P61073 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.61■□□□□ 0.25
CXCR4P61073 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CXCR4P61073 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.61■□□□□ 0.25
CXCR4P61073 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CXCR4P61073 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CXCR4P61073 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.6■□□□□ 0.25
CXCR4P61073 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.6■□□□□ 0.25
CXCR4P61073 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.6■□□□□ 0.25
CXCR4P61073 RCC2P3-201ENST00000418112 1537 ntBASIC16.6■□□□□ 0.25
CXCR4P61073 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CXCR4P61073 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.6■□□□□ 0.25
CXCR4P61073 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.6■□□□□ 0.25
CXCR4P61073 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.6■□□□□ 0.25
CXCR4P61073 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.6■□□□□ 0.25
CXCR4P61073 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.6■□□□□ 0.25
CXCR4P61073 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.6■□□□□ 0.25
CXCR4P61073 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.6■□□□□ 0.25
CXCR4P61073 AP003097.1-201ENST00000530657 1135 ntBASIC16.6■□□□□ 0.25
CXCR4P61073 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
CXCR4P61073 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CXCR4P61073 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CXCR4P61073 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.6■□□□□ 0.25
CXCR4P61073 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.6■□□□□ 0.25
CXCR4P61073 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXCR4P61073 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms