Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB38P57729 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB38P57729 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RAB38P57729 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB38P57729 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB38P57729 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB38P57729 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB38P57729 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB38P57729 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB38P57729 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB38P57729 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB38P57729 AC116407.4-201ENST00000623319 1061 ntBASIC17.11■□□□□ 0.33
RAB38P57729 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB38P57729 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB38P57729 IER3-202ENST00000376377 1350 ntBASIC17.11■□□□□ 0.33
RAB38P57729 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB38P57729 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB38P57729 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB38P57729 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB38P57729 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB38P57729 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RAB38P57729 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 Z83836.1-201ENST00000624605 1642 ntBASIC17.1■□□□□ 0.33
RAB38P57729 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAB38P57729 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAB38P57729 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB38P57729 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RAB38P57729 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.1■□□□□ 0.33
RAB38P57729 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB38P57729 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB38P57729 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB38P57729 AC011498.5-201ENST00000592027 486 ntBASIC17.1■□□□□ 0.33
RAB38P57729 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.1■□□□□ 0.33
RAB38P57729 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB38P57729 AP000550.4-202ENST00000639755 178 ntBASIC17.1■□□□□ 0.33
RAB38P57729 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB38P57729 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 AL353692.3-201ENST00000407031 1396 ntBASIC17.1■□□□□ 0.33
RAB38P57729 LINC00167-201ENST00000530583 1419 ntBASIC17.1■□□□□ 0.33
RAB38P57729 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB38P57729 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB38P57729 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB38P57729 ABALON-201ENST00000629058 1903 ntBASIC17.09■□□□□ 0.33
RAB38P57729 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAB38P57729 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB38P57729 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB38P57729 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB38P57729 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB38P57729 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB38P57729 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB38P57729 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB38P57729 AC091076.1-201ENST00000610741 619 ntBASIC17.09■□□□□ 0.33
RAB38P57729 AL358472.4-201ENST00000633140 710 ntBASIC17.09■□□□□ 0.33
RAB38P57729 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB38P57729 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB38P57729 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB38P57729 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB38P57729 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 LINC00602-201ENST00000629776 2065 ntBASIC17.09■□□□□ 0.33
RAB38P57729 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB38P57729 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB38P57729 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms