Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CMC4P56277 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.57□□□□□ -0.24
CMC4P56277 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CMC4P56277 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CMC4P56277 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.57□□□□□ -0.24
CMC4P56277 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.57□□□□□ -0.24
CMC4P56277 AL645929.1-201ENST00000420084 975 ntBASIC13.57□□□□□ -0.24
CMC4P56277 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.57□□□□□ -0.24
CMC4P56277 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.57□□□□□ -0.24
CMC4P56277 KRT18P35-201ENST00000510488 1269 ntBASIC13.57□□□□□ -0.24
CMC4P56277 GUSBP12-201ENST00000513727 720 ntBASIC13.57□□□□□ -0.24
CMC4P56277 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.57□□□□□ -0.24
CMC4P56277 GPR32P1-201ENST00000601788 811 ntBASIC13.57□□□□□ -0.24
CMC4P56277 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CMC4P56277 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CMC4P56277 AC079602.3-201ENST00000623931 403 ntBASIC13.57□□□□□ -0.24
CMC4P56277 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.57□□□□□ -0.24
CMC4P56277 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.57□□□□□ -0.24
CMC4P56277 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CMC4P56277 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.57□□□□□ -0.24
CMC4P56277 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CMC4P56277 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMC4P56277 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CMC4P56277 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CMC4P56277 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.56□□□□□ -0.24
CMC4P56277 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CMC4P56277 AC098818.2-201ENST00000564925 2320 ntBASIC13.56□□□□□ -0.24
CMC4P56277 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.56□□□□□ -0.24
CMC4P56277 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CMC4P56277 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.56□□□□□ -0.24
CMC4P56277 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.56□□□□□ -0.24
CMC4P56277 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.56□□□□□ -0.24
CMC4P56277 AC090616.6-201ENST00000582640 721 ntBASIC13.56□□□□□ -0.24
CMC4P56277 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CMC4P56277 AP000550.4-202ENST00000639755 178 ntBASIC13.56□□□□□ -0.24
CMC4P56277 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.56□□□□□ -0.24
CMC4P56277 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CMC4P56277 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.56□□□□□ -0.24
CMC4P56277 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.56□□□□□ -0.24
CMC4P56277 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CMC4P56277 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CMC4P56277 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMC4P56277 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CMC4P56277 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.55□□□□□ -0.24
CMC4P56277 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 WIZP1-201ENST00000531444 2299 ntBASIC13.55□□□□□ -0.24
CMC4P56277 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.55□□□□□ -0.24
CMC4P56277 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.55□□□□□ -0.24
CMC4P56277 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.55□□□□□ -0.24
CMC4P56277 BX276092.5-203ENST00000456199 560 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms