Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2JP52435 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.45■□□□□ 0.38
POLR2JP52435 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.45■□□□□ 0.38
POLR2JP52435 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2JP52435 DGCR10-201ENST00000609839 495 ntBASIC17.45■□□□□ 0.38
POLR2JP52435 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.45■□□□□ 0.38
POLR2JP52435 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.45■□□□□ 0.38
POLR2JP52435 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2JP52435 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2JP52435 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2JP52435 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
POLR2JP52435 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
POLR2JP52435 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.45■□□□□ 0.38
POLR2JP52435 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR2JP52435 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
POLR2JP52435 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 AC093010.1-201ENST00000473625 1624 ntBASIC17.44■□□□□ 0.38
POLR2JP52435 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
POLR2JP52435 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
POLR2JP52435 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
POLR2JP52435 KRT18P55-202ENST00000578578 1546 ntBASIC17.44■□□□□ 0.38
POLR2JP52435 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
POLR2JP52435 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 CA15P1-201ENST00000481698 905 ntBASIC17.44■□□□□ 0.38
POLR2JP52435 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.44■□□□□ 0.38
POLR2JP52435 CD177P1-201ENST00000606252 935 ntBASIC17.44■□□□□ 0.38
POLR2JP52435 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.44■□□□□ 0.38
POLR2JP52435 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR2JP52435 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
POLR2JP52435 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2JP52435 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2JP52435 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2JP52435 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2JP52435 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
POLR2JP52435 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2JP52435 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2JP52435 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2JP52435 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
POLR2JP52435 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2JP52435 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2JP52435 AC012313.1-201ENST00000593393 3059 ntBASIC17.43■□□□□ 0.38
POLR2JP52435 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR2JP52435 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
POLR2JP52435 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.43■□□□□ 0.38
POLR2JP52435 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
POLR2JP52435 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.43■□□□□ 0.38
POLR2JP52435 FAM197Y4-202ENST00000622692 608 ntBASIC17.43■□□□□ 0.38
POLR2JP52435 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2JP52435 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR2JP52435 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2JP52435 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR2JP52435 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR2JP52435 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.43■□□□□ 0.38
POLR2JP52435 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2JP52435 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2JP52435 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2JP52435 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
POLR2JP52435 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
POLR2JP52435 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2JP52435 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2JP52435 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2JP52435 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2JP52435 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2JP52435 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.42■□□□□ 0.38
POLR2JP52435 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2JP52435 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR2JP52435 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2JP52435 PKD1P1-201ENST00000458669 6805 ntBASIC17.42■□□□□ 0.38
POLR2JP52435 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
POLR2JP52435 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR2JP52435 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.42■□□□□ 0.38
POLR2JP52435 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.42■□□□□ 0.38
POLR2JP52435 AC116562.2-201ENST00000507042 360 ntBASIC17.42■□□□□ 0.38
POLR2JP52435 AC097488.1-201ENST00000507834 756 ntBASIC17.42■□□□□ 0.38
POLR2JP52435 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.42■□□□□ 0.38
POLR2JP52435 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.42■□□□□ 0.38
POLR2JP52435 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
POLR2JP52435 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
POLR2JP52435 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR2JP52435 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2JP52435 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2JP52435 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2JP52435 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2JP52435 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms