Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD11P31277 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 PLAC8-201ENST00000311507 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD11P31277 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 AC115619.1-201ENST00000567376 1605 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXD11P31277 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD11P31277 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HOXD11P31277 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD11P31277 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
HOXD11P31277 AC226101.1-201ENST00000401483 387 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXD11P31277 UPF3AP3-201ENST00000420996 769 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 AC011242.1-201ENST00000433596 1158 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 RHOQP3-201ENST00000437982 621 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 MFAP1P1-201ENST00000442257 1255 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 MTND4P18-201ENST00000447010 465 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 TSPY17P-201ENST00000450329 467 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 ZNF886P-201ENST00000450781 723 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXD11P31277 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXD11P31277 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXD11P31277 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD11P31277 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC19.45■□□□□ 0.7
HOXD11P31277 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXD11P31277 BNIP3P19-201ENST00000605397 577 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 Z99289.3-201ENST00000605586 594 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 AP001033.2-201ENST00000609701 1003 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 AC017083.3-201ENST00000609955 700 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 AL023803.3-201ENST00000615559 522 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD11P31277 CR382285.2-201ENST00000624662 1495 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 AL137060.1-201ENST00000618151 2648 ntBASIC19.45■□□□□ 0.7
HOXD11P31277 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD11P31277 CLEC4C-205ENST00000542353 1314 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD11P31277 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD11P31277 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD11P31277 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
HOXD11P31277 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD11P31277 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD11P31277 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD11P31277 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD11P31277 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HOXD11P31277 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HOXD11P31277 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXD11P31277 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXD11P31277 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD11P31277 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXD11P31277 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HOXD11P31277 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD11P31277 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXD11P31277 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HOXD11P31277 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXD11P31277 RPS8P6-201ENST00000426177 609 ntBASIC19.44■□□□□ 0.7
HOXD11P31277 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXD11P31277 AC080079.1-201ENST00000509326 1045 ntBASIC19.44■□□□□ 0.7
HOXD11P31277 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXD11P31277 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXD11P31277 AP002761.2-201ENST00000541254 618 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXD11P31277 AL356800.1-201ENST00000553339 735 ntBASIC19.44■□□□□ 0.7
HOXD11P31277 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXD11P31277 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXD11P31277 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXD11P31277 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXD11P31277 AC011939.3-201ENST00000613686 466 ntBASIC19.44■□□□□ 0.7
HOXD11P31277 AL121895.2-201ENST00000619558 447 ntBASIC19.44■□□□□ 0.7
HOXD11P31277 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD11P31277 AL122008.3-201ENST00000412483 1723 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXD11P31277 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD11P31277 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HOXD11P31277 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXD11P31277 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD11P31277 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD11P31277 AC096733.2-201ENST00000609937 1394 ntBASIC19.44■□□□□ 0.7
HOXD11P31277 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 IL25-202ENST00000397242 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 NPM1P48-201ENST00000436002 853 ntBASIC19.43■□□□□ 0.7
HOXD11P31277 PSMD10P1-201ENST00000436861 681 ntBASIC19.43■□□□□ 0.7
HOXD11P31277 AL390879.1-201ENST00000439143 386 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms