Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBB4AP04350 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TUBB4AP04350 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TUBB4AP04350 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBB4AP04350 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TUBB4AP04350 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBB4AP04350 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBB4AP04350 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.54■□□□□ 0.72
TUBB4AP04350 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TUBB4AP04350 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.53■□□□□ 0.72
TUBB4AP04350 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBB4AP04350 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBB4AP04350 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.53■□□□□ 0.72
TUBB4AP04350 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TUBB4AP04350 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.53■□□□□ 0.72
TUBB4AP04350 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.53■□□□□ 0.72
TUBB4AP04350 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBB4AP04350 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TUBB4AP04350 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TUBB4AP04350 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.53■□□□□ 0.72
TUBB4AP04350 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBB4AP04350 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TUBB4AP04350 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.53■□□□□ 0.72
TUBB4AP04350 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
TUBB4AP04350 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBB4AP04350 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB4AP04350 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TUBB4AP04350 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TUBB4AP04350 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.52■□□□□ 0.72
TUBB4AP04350 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.52■□□□□ 0.72
TUBB4AP04350 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.52■□□□□ 0.72
TUBB4AP04350 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.52■□□□□ 0.72
TUBB4AP04350 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.52■□□□□ 0.72
TUBB4AP04350 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.52■□□□□ 0.72
TUBB4AP04350 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.52■□□□□ 0.72
TUBB4AP04350 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
TUBB4AP04350 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.52■□□□□ 0.72
TUBB4AP04350 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB4AP04350 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.52■□□□□ 0.71
TUBB4AP04350 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.52■□□□□ 0.71
TUBB4AP04350 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TUBB4AP04350 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TUBB4AP04350 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TUBB4AP04350 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TUBB4AP04350 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.51■□□□□ 0.71
TUBB4AP04350 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TUBB4AP04350 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TUBB4AP04350 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.51■□□□□ 0.71
TUBB4AP04350 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.51■□□□□ 0.71
TUBB4AP04350 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.51■□□□□ 0.71
TUBB4AP04350 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.51■□□□□ 0.71
TUBB4AP04350 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TUBB4AP04350 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
TUBB4AP04350 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.51■□□□□ 0.71
TUBB4AP04350 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB4AP04350 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB4AP04350 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB4AP04350 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TUBB4AP04350 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms