Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.76■□□□□ 0.43
TNFP01375 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
TNFP01375 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFP01375 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFP01375 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TNFP01375 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFP01375 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFP01375 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFP01375 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFP01375 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TNFP01375 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFP01375 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNFP01375 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFP01375 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.76■□□□□ 0.43
TNFP01375 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFP01375 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFP01375 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFP01375 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFP01375 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TNFP01375 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFP01375 KRT18P65-201ENST00000439811 1286 ntBASIC17.75■□□□□ 0.43
TNFP01375 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.75■□□□□ 0.43
TNFP01375 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
TNFP01375 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFP01375 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFP01375 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFP01375 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFP01375 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFP01375 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TNFP01375 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFP01375 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFP01375 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFP01375 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.74■□□□□ 0.43
TNFP01375 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TNFP01375 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.74■□□□□ 0.43
TNFP01375 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TNFP01375 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TNFP01375 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TNFP01375 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
TNFP01375 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.74■□□□□ 0.43
TNFP01375 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.74■□□□□ 0.43
TNFP01375 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.74■□□□□ 0.43
TNFP01375 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TNFP01375 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.74■□□□□ 0.43
TNFP01375 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.74■□□□□ 0.43
TNFP01375 AL591684.3-201ENST00000605187 298 ntBASIC17.74■□□□□ 0.43
TNFP01375 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.74■□□□□ 0.43
TNFP01375 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TNFP01375 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFP01375 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFP01375 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFP01375 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFP01375 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TNFP01375 KRT8P10-201ENST00000450021 1447 ntBASIC17.73■□□□□ 0.43
TNFP01375 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFP01375 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFP01375 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TNFP01375 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFP01375 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFP01375 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFP01375 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TNFP01375 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFP01375 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFP01375 AC096582.2-201ENST00000510860 516 ntBASIC17.73■□□□□ 0.43
TNFP01375 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.73■□□□□ 0.43
TNFP01375 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFP01375 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.73■□□□□ 0.43
TNFP01375 MIR5100-201ENST00000579544 119 ntBASIC17.73■□□□□ 0.43
TNFP01375 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.73■□□□□ 0.43
TNFP01375 BNIP3P18-201ENST00000593976 575 ntBASIC17.73■□□□□ 0.43
TNFP01375 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TNFP01375 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TNFP01375 AL031008.1-201ENST00000619963 541 ntBASIC17.73■□□□□ 0.43
TNFP01375 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFP01375 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFP01375 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFP01375 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFP01375 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TNFP01375 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFP01375 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFP01375 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFP01375 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFP01375 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms