Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PDCD6O75340 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.41■□□□□ 0.06
PDCD6O75340 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 TSPY20P-201ENST00000450910 630 ntBASIC15.41■□□□□ 0.06
PDCD6O75340 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.41■□□□□ 0.06
PDCD6O75340 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.41■□□□□ 0.06
PDCD6O75340 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.41■□□□□ 0.06
PDCD6O75340 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.41■□□□□ 0.06
PDCD6O75340 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.41■□□□□ 0.06
PDCD6O75340 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.41■□□□□ 0.06
PDCD6O75340 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.41■□□□□ 0.06
PDCD6O75340 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PDCD6O75340 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PDCD6O75340 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDCD6O75340 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
PDCD6O75340 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.4■□□□□ 0.06
PDCD6O75340 AC093010.1-201ENST00000473625 1624 ntBASIC15.4■□□□□ 0.06
PDCD6O75340 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.4■□□□□ 0.06
PDCD6O75340 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.4■□□□□ 0.06
PDCD6O75340 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PDCD6O75340 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.4■□□□□ 0.06
PDCD6O75340 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 SLC25A1P2-201ENST00000430693 912 ntBASIC15.4■□□□□ 0.06
PDCD6O75340 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.4■□□□□ 0.06
PDCD6O75340 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.4■□□□□ 0.06
PDCD6O75340 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.4■□□□□ 0.06
PDCD6O75340 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 AC026471.5-201ENST00000615068 467 ntBASIC15.4■□□□□ 0.06
PDCD6O75340 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PDCD6O75340 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.4■□□□□ 0.06
PDCD6O75340 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PDCD6O75340 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PDCD6O75340 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PDCD6O75340 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PDCD6O75340 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PDCD6O75340 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.4■□□□□ 0.06
PDCD6O75340 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.4■□□□□ 0.06
PDCD6O75340 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PDCD6O75340 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.4■□□□□ 0.06
PDCD6O75340 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDCD6O75340 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.39■□□□□ 0.05
PDCD6O75340 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PDCD6O75340 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.39■□□□□ 0.05
PDCD6O75340 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PDCD6O75340 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDCD6O75340 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDCD6O75340 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.39■□□□□ 0.05
PDCD6O75340 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 AL158047.1-201ENST00000445918 881 ntBASIC15.39■□□□□ 0.05
PDCD6O75340 TSPY17P-201ENST00000450329 467 ntBASIC15.39■□□□□ 0.05
PDCD6O75340 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.39■□□□□ 0.05
PDCD6O75340 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 WWOX-216ENST00000569818 525 ntBASIC15.39■□□□□ 0.05
PDCD6O75340 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.39■□□□□ 0.05
PDCD6O75340 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 AL023803.3-201ENST00000615559 522 ntBASIC15.39■□□□□ 0.05
PDCD6O75340 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDCD6O75340 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
PDCD6O75340 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDCD6O75340 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.39■□□□□ 0.05
PDCD6O75340 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms