Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 KRT18P23-201ENST00000435622 1283 ntBASIC17.31■□□□□ 0.36
SCN2BO60939 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.31■□□□□ 0.36
SCN2BO60939 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.31■□□□□ 0.36
SCN2BO60939 FITM1-202ENST00000559294 800 ntBASIC17.31■□□□□ 0.36
SCN2BO60939 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.31■□□□□ 0.36
SCN2BO60939 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.31■□□□□ 0.36
SCN2BO60939 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.31■□□□□ 0.36
SCN2BO60939 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCN2BO60939 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN2BO60939 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN2BO60939 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCN2BO60939 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCN2BO60939 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SCN2BO60939 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SCN2BO60939 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN2BO60939 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN2BO60939 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCN2BO60939 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN2BO60939 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.3■□□□□ 0.36
SCN2BO60939 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SCN2BO60939 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
SCN2BO60939 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 AC093010.1-201ENST00000473625 1624 ntBASIC17.3■□□□□ 0.36
SCN2BO60939 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.3■□□□□ 0.36
SCN2BO60939 UNC93B2-201ENST00000285383 730 ntBASIC17.3■□□□□ 0.36
SCN2BO60939 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.3■□□□□ 0.36
SCN2BO60939 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SCN2BO60939 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.3■□□□□ 0.36
SCN2BO60939 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.3■□□□□ 0.36
SCN2BO60939 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.3■□□□□ 0.36
SCN2BO60939 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.3■□□□□ 0.36
SCN2BO60939 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.3■□□□□ 0.36
SCN2BO60939 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN2BO60939 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SCN2BO60939 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SCN2BO60939 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SCN2BO60939 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.29■□□□□ 0.36
SCN2BO60939 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SCN2BO60939 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SCN2BO60939 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.29■□□□□ 0.36
SCN2BO60939 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.29■□□□□ 0.36
SCN2BO60939 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SCN2BO60939 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.29■□□□□ 0.36
SCN2BO60939 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SCN2BO60939 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.29■□□□□ 0.36
SCN2BO60939 TMEM191A-211ENST00000637163 1067 ntBASIC17.29■□□□□ 0.36
SCN2BO60939 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.29■□□□□ 0.36
SCN2BO60939 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.29■□□□□ 0.36
SCN2BO60939 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.29■□□□□ 0.36
SCN2BO60939 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN2BO60939 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.28■□□□□ 0.36
SCN2BO60939 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.28■□□□□ 0.36
SCN2BO60939 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SCN2BO60939 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.28■□□□□ 0.36
SCN2BO60939 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.28■□□□□ 0.36
SCN2BO60939 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 TSPY7P-201ENST00000431358 1114 ntBASIC17.28■□□□□ 0.36
SCN2BO60939 AC007663.1-201ENST00000438948 1240 ntBASIC17.28■□□□□ 0.36
SCN2BO60939 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.28■□□□□ 0.36
SCN2BO60939 AC008550.1-201ENST00000511500 884 ntBASIC17.28■□□□□ 0.36
SCN2BO60939 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.28■□□□□ 0.36
SCN2BO60939 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.28■□□□□ 0.36
SCN2BO60939 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.28■□□□□ 0.36
SCN2BO60939 AC104390.1-201ENST00000555663 520 ntBASIC17.28■□□□□ 0.36
SCN2BO60939 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms