Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.85■■□□□ 1.25
CACNA1FO60840 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CACNA1FO60840 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.85■■□□□ 1.25
CACNA1FO60840 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CACNA1FO60840 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.85■■□□□ 1.25
CACNA1FO60840 ABALON-201ENST00000629058 1903 ntBASIC22.85■■□□□ 1.25
CACNA1FO60840 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.85■■□□□ 1.25
CACNA1FO60840 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CACNA1FO60840 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CACNA1FO60840 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.85■■□□□ 1.25
CACNA1FO60840 AP000867.3-201ENST00000524675 377 ntBASIC22.85■■□□□ 1.25
CACNA1FO60840 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CACNA1FO60840 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.85■■□□□ 1.25
CACNA1FO60840 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CACNA1FO60840 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.85■■□□□ 1.25
CACNA1FO60840 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CACNA1FO60840 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1FO60840 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.84■■□□□ 1.25
CACNA1FO60840 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CACNA1FO60840 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
CACNA1FO60840 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.84■■□□□ 1.25
CACNA1FO60840 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.84■■□□□ 1.25
CACNA1FO60840 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1FO60840 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1FO60840 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC22.84■■□□□ 1.25
CACNA1FO60840 KLF4P1-201ENST00000412782 1185 ntBASIC22.84■■□□□ 1.25
CACNA1FO60840 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1FO60840 DUTP2-201ENST00000519164 463 ntBASIC22.84■■□□□ 1.25
CACNA1FO60840 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.84■■□□□ 1.25
CACNA1FO60840 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.84■■□□□ 1.25
CACNA1FO60840 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1FO60840 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1FO60840 AC104581.1-202ENST00000635932 2618 ntBASIC22.84■■□□□ 1.25
CACNA1FO60840 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1FO60840 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
CACNA1FO60840 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1FO60840 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.84■■□□□ 1.25
CACNA1FO60840 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1FO60840 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1FO60840 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CACNA1FO60840 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1FO60840 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1FO60840 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CACNA1FO60840 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CACNA1FO60840 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC22.83■■□□□ 1.25
CACNA1FO60840 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.83■■□□□ 1.25
CACNA1FO60840 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC22.83■■□□□ 1.25
CACNA1FO60840 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CACNA1FO60840 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CACNA1FO60840 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
CACNA1FO60840 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC22.83■■□□□ 1.25
CACNA1FO60840 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
CACNA1FO60840 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.83■■□□□ 1.25
CACNA1FO60840 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CACNA1FO60840 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
CACNA1FO60840 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CACNA1FO60840 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC22.83■■□□□ 1.24
CACNA1FO60840 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.83■■□□□ 1.24
CACNA1FO60840 SKP2-204ENST00000508514 821 ntTSL 3 BASIC22.83■■□□□ 1.24
CACNA1FO60840 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.83■■□□□ 1.24
CACNA1FO60840 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.83■■□□□ 1.24
CACNA1FO60840 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
CACNA1FO60840 AC100803.2-201ENST00000562459 1963 ntBASIC22.83■■□□□ 1.24
CACNA1FO60840 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
CACNA1FO60840 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CACNA1FO60840 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.24
CACNA1FO60840 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CACNA1FO60840 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CACNA1FO60840 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CACNA1FO60840 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC22.82■■□□□ 1.24
CACNA1FO60840 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
CACNA1FO60840 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.82■■□□□ 1.24
CACNA1FO60840 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC22.82■■□□□ 1.24
CACNA1FO60840 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CACNA1FO60840 AL450487.1-201ENST00000426799 995 ntBASIC22.82■■□□□ 1.24
CACNA1FO60840 AC007967.3-201ENST00000434308 558 ntBASIC22.82■■□□□ 1.24
CACNA1FO60840 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC22.82■■□□□ 1.24
CACNA1FO60840 GZMM-202ENST00000592501 941 ntTSL 3 BASIC22.82■■□□□ 1.24
CACNA1FO60840 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CACNA1FO60840 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CACNA1FO60840 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CACNA1FO60840 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CACNA1FO60840 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CACNA1FO60840 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CACNA1FO60840 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.82■■□□□ 1.24
CACNA1FO60840 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC22.82■■□□□ 1.24
CACNA1FO60840 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.82■■□□□ 1.24
CACNA1FO60840 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1FO60840 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1FO60840 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1FO60840 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC22.81■■□□□ 1.24
CACNA1FO60840 TSPY19P-201ENST00000418461 509 ntBASIC22.81■■□□□ 1.24
CACNA1FO60840 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.81■■□□□ 1.24
CACNA1FO60840 TSPY18P-201ENST00000441642 509 ntBASIC22.81■■□□□ 1.24
CACNA1FO60840 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
CACNA1FO60840 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
CACNA1FO60840 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1FO60840 AC135050.7-201ENST00000624508 2218 ntBASIC22.81■■□□□ 1.24
CACNA1FO60840 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.81■■□□□ 1.24
CACNA1FO60840 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms