Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.55■□□□□ 0.08
SSNA1O43805 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.55■□□□□ 0.08
SSNA1O43805 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.55■□□□□ 0.08
SSNA1O43805 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.55■□□□□ 0.08
SSNA1O43805 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.55■□□□□ 0.08
SSNA1O43805 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 MTMR9LP-203ENST00000426597 1545 ntBASIC15.55■□□□□ 0.08
SSNA1O43805 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.55■□□□□ 0.08
SSNA1O43805 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SSNA1O43805 AP001330.3-201ENST00000520123 633 ntBASIC15.55■□□□□ 0.08
SSNA1O43805 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
SSNA1O43805 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.55■□□□□ 0.08
SSNA1O43805 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SSNA1O43805 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.55■□□□□ 0.08
SSNA1O43805 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SSNA1O43805 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 AC007326.2-201ENST00000624224 7579 ntBASIC15.55■□□□□ 0.08
SSNA1O43805 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.55■□□□□ 0.08
SSNA1O43805 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.55■□□□□ 0.08
SSNA1O43805 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SSNA1O43805 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.55■□□□□ 0.08
SSNA1O43805 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSNA1O43805 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SSNA1O43805 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SSNA1O43805 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSNA1O43805 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SSNA1O43805 AC006116.8-202ENST00000587620 1550 ntBASIC15.54■□□□□ 0.08
SSNA1O43805 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSNA1O43805 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.54■□□□□ 0.08
SSNA1O43805 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.54■□□□□ 0.08
SSNA1O43805 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SSNA1O43805 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSNA1O43805 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSNA1O43805 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SSNA1O43805 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.54■□□□□ 0.08
SSNA1O43805 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SSNA1O43805 TSPY21P-201ENST00000433481 731 ntBASIC15.54■□□□□ 0.08
SSNA1O43805 C2orf69P4-201ENST00000565394 541 ntBASIC15.54■□□□□ 0.08
SSNA1O43805 TERF1P2-201ENST00000583350 1212 ntBASIC15.54■□□□□ 0.08
SSNA1O43805 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
SSNA1O43805 AC008556.1-201ENST00000610908 2040 ntBASIC15.54■□□□□ 0.08
SSNA1O43805 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
SSNA1O43805 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSNA1O43805 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.54■□□□□ 0.08
SSNA1O43805 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSNA1O43805 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSNA1O43805 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.54■□□□□ 0.08
SSNA1O43805 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.54■□□□□ 0.08
SSNA1O43805 DOC2GP-204ENST00000639052 2548 ntBASIC15.54■□□□□ 0.08
SSNA1O43805 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSNA1O43805 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.54■□□□□ 0.08
SSNA1O43805 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SSNA1O43805 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
SSNA1O43805 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SSNA1O43805 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SSNA1O43805 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.53■□□□□ 0.08
SSNA1O43805 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
SSNA1O43805 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.53■□□□□ 0.08
SSNA1O43805 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.53■□□□□ 0.08
SSNA1O43805 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SSNA1O43805 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SSNA1O43805 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SSNA1O43805 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.53■□□□□ 0.08
SSNA1O43805 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSNA1O43805 TERF1P5-201ENST00000477545 1207 ntBASIC15.53■□□□□ 0.08
SSNA1O43805 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.53■□□□□ 0.08
SSNA1O43805 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.53■□□□□ 0.08
SSNA1O43805 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms