Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CHD1O14646 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
CHD1O14646 COX5A-202ENST00000562233 441 ntTSL 3 BASIC29.32■■■□□ 2.28
CHD1O14646 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC29.32■■■□□ 2.28
CHD1O14646 AC004790.2-201ENST00000623588 572 ntBASIC29.32■■■□□ 2.28
CHD1O14646 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CHD1O14646 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CHD1O14646 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CHD1O14646 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
CHD1O14646 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CHD1O14646 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC29.31■■■□□ 2.28
CHD1O14646 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC29.31■■■□□ 2.28
CHD1O14646 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC29.31■■■□□ 2.28
CHD1O14646 AC004835.2-201ENST00000603762 682 ntBASIC29.31■■■□□ 2.28
CHD1O14646 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
CHD1O14646 AL805961.1-202ENST00000641562 540 ntBASIC29.31■■■□□ 2.28
CHD1O14646 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CHD1O14646 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC29.31■■■□□ 2.28
CHD1O14646 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC29.31■■■□□ 2.28
CHD1O14646 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CHD1O14646 LINC00602-201ENST00000629776 2065 ntBASIC29.31■■■□□ 2.28
CHD1O14646 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC29.31■■■□□ 2.28
CHD1O14646 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
CHD1O14646 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC29.31■■■□□ 2.28
CHD1O14646 RHOQP3-201ENST00000437982 621 ntBASIC29.31■■■□□ 2.28
CHD1O14646 AC015911.4-201ENST00000588022 1070 ntBASIC29.31■■■□□ 2.28
CHD1O14646 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
CHD1O14646 LINC00628-201ENST00000628516 1289 ntBASIC29.31■■■□□ 2.28
CHD1O14646 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CHD1O14646 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC29.3■■■□□ 2.28
CHD1O14646 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHD1O14646 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHD1O14646 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHD1O14646 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC29.3■■■□□ 2.28
CHD1O14646 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CHD1O14646 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC29.3■■■□□ 2.28
CHD1O14646 DAD1-205ENST00000543337 501 ntTSL 3 BASIC29.3■■■□□ 2.28
CHD1O14646 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC29.3■■■□□ 2.28
CHD1O14646 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC29.3■■■□□ 2.28
CHD1O14646 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC29.29■■■□□ 2.28
CHD1O14646 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC29.29■■■□□ 2.28
CHD1O14646 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC29.29■■■□□ 2.28
CHD1O14646 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHD1O14646 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC29.29■■■□□ 2.28
CHD1O14646 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC29.29■■■□□ 2.28
CHD1O14646 HFE2-206ENST00000634927 506 ntTSL 4 BASIC29.29■■■□□ 2.28
CHD1O14646 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHD1O14646 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
CHD1O14646 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHD1O14646 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHD1O14646 PWWP2AP1-201ENST00000429776 2273 ntBASIC29.29■■■□□ 2.28
CHD1O14646 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHD1O14646 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC29.29■■■□□ 2.28
CHD1O14646 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
CHD1O14646 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHD1O14646 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHD1O14646 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC29.28■■■□□ 2.28
CHD1O14646 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC29.28■■■□□ 2.28
CHD1O14646 AC105339.1-204ENST00000636249 355 ntBASIC29.28■■■□□ 2.28
CHD1O14646 AC099343.3-201ENST00000605834 2503 ntBASIC29.28■■■□□ 2.28
CHD1O14646 BCAR1-209ENST00000546196 1340 ntBASIC29.28■■■□□ 2.28
CHD1O14646 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHD1O14646 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC29.28■■■□□ 2.28
CHD1O14646 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHD1O14646 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHD1O14646 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHD1O14646 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHD1O14646 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC29.28■■■□□ 2.28
CHD1O14646 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
CHD1O14646 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC29.28■■■□□ 2.28
CHD1O14646 SERF2-217ENST00000630046 862 ntTSL 5 BASIC29.28■■■□□ 2.28
CHD1O14646 AC012676.1-201ENST00000574705 1949 ntBASIC29.28■■■□□ 2.28
CHD1O14646 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CHD1O14646 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHD1O14646 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC29.27■■■□□ 2.28
CHD1O14646 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CHD1O14646 HLA-DRB6-201ENST00000411500 1235 ntBASIC29.27■■■□□ 2.28
CHD1O14646 UGT1A2P-201ENST00000454886 866 ntBASIC29.27■■■□□ 2.28
CHD1O14646 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CHD1O14646 SMN2-210ENST00000511812 867 ntTSL 2 BASIC29.27■■■□□ 2.28
CHD1O14646 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC29.27■■■□□ 2.28
CHD1O14646 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC29.27■■■□□ 2.28
CHD1O14646 RN7SL204P-201ENST00000582831 262 ntBASIC29.27■■■□□ 2.28
CHD1O14646 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHD1O14646 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CHD1O14646 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHD1O14646 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CHD1O14646 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC29.27■■■□□ 2.28
CHD1O14646 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC29.27■■■□□ 2.28
CHD1O14646 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC29.26■■■□□ 2.28
CHD1O14646 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
CHD1O14646 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
CHD1O14646 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC29.26■■■□□ 2.27
CHD1O14646 DUT-210ENST00000559935 569 ntTSL 3 BASIC29.26■■■□□ 2.27
CHD1O14646 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC29.26■■■□□ 2.27
CHD1O14646 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC29.26■■■□□ 2.27
CHD1O14646 AQP6-205ENST00000618286 829 ntTSL 5 BASIC29.26■■■□□ 2.27
CHD1O14646 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CHD1O14646 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
CHD1O14646 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms