Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PIK3C2AO00443 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC24.32■■□□□ 1.48
PIK3C2AO00443 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PIK3C2AO00443 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC24.32■■□□□ 1.48
PIK3C2AO00443 LAGE3P1-201ENST00000425356 484 ntBASIC24.32■■□□□ 1.48
PIK3C2AO00443 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC24.32■■□□□ 1.48
PIK3C2AO00443 AC092183.1-201ENST00000469884 875 ntBASIC24.32■■□□□ 1.48
PIK3C2AO00443 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PIK3C2AO00443 AC027601.4-201ENST00000611259 610 ntBASIC24.32■■□□□ 1.48
PIK3C2AO00443 AC055717.3-201ENST00000622967 595 ntBASIC24.32■■□□□ 1.48
PIK3C2AO00443 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PIK3C2AO00443 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PIK3C2AO00443 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
PIK3C2AO00443 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC24.31■■□□□ 1.48
PIK3C2AO00443 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PIK3C2AO00443 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PIK3C2AO00443 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PIK3C2AO00443 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC24.31■■□□□ 1.48
PIK3C2AO00443 HS6ST1P1-201ENST00000481504 1234 ntBASIC24.31■■□□□ 1.48
PIK3C2AO00443 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PIK3C2AO00443 SDCCAG3P1-201ENST00000589292 1150 ntBASIC24.31■■□□□ 1.48
PIK3C2AO00443 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PIK3C2AO00443 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PIK3C2AO00443 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PIK3C2AO00443 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PIK3C2AO00443 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PIK3C2AO00443 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PIK3C2AO00443 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PIK3C2AO00443 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
PIK3C2AO00443 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC24.31■■□□□ 1.48
PIK3C2AO00443 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC24.3■■□□□ 1.48
PIK3C2AO00443 MIR940-201ENST00000401276 94 ntBASIC24.3■■□□□ 1.48
PIK3C2AO00443 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC24.3■■□□□ 1.48
PIK3C2AO00443 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC24.3■■□□□ 1.48
PIK3C2AO00443 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC24.3■■□□□ 1.48
PIK3C2AO00443 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC24.3■■□□□ 1.48
PIK3C2AO00443 AP000867.4-201ENST00000641616 219 ntBASIC24.3■■□□□ 1.48
PIK3C2AO00443 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PIK3C2AO00443 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PIK3C2AO00443 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PIK3C2AO00443 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC24.3■■□□□ 1.48
PIK3C2AO00443 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PIK3C2AO00443 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PIK3C2AO00443 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC24.3■■□□□ 1.48
PIK3C2AO00443 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PIK3C2AO00443 YBX2P1-201ENST00000394192 760 ntBASIC24.3■■□□□ 1.48
PIK3C2AO00443 AC096633.1-201ENST00000422446 749 ntBASIC24.3■■□□□ 1.48
PIK3C2AO00443 GPX1P2-201ENST00000429271 606 ntBASIC24.3■■□□□ 1.48
PIK3C2AO00443 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC24.3■■□□□ 1.48
PIK3C2AO00443 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC24.3■■□□□ 1.48
PIK3C2AO00443 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC24.3■■□□□ 1.48
PIK3C2AO00443 PMPCAP1-201ENST00000508114 1576 ntBASIC24.3■■□□□ 1.48
PIK3C2AO00443 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PIK3C2AO00443 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PIK3C2AO00443 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PIK3C2AO00443 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PIK3C2AO00443 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PIK3C2AO00443 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PIK3C2AO00443 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PIK3C2AO00443 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PIK3C2AO00443 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
PIK3C2AO00443 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PIK3C2AO00443 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
PIK3C2AO00443 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PIK3C2AO00443 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC24.29■■□□□ 1.48
PIK3C2AO00443 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC24.29■■□□□ 1.48
PIK3C2AO00443 AC073621.1-201ENST00000392730 636 ntBASIC24.29■■□□□ 1.48
PIK3C2AO00443 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC24.29■■□□□ 1.48
PIK3C2AO00443 ETFA-208ENST00000559602 792 ntTSL 3 BASIC24.29■■□□□ 1.48
PIK3C2AO00443 HOTTIP_1.1-201ENST00000620415 57 ntBASIC24.29■■□□□ 1.48
PIK3C2AO00443 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PIK3C2AO00443 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC24.29■■□□□ 1.48
PIK3C2AO00443 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
PIK3C2AO00443 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PIK3C2AO00443 SIGLEC16-201ENST00000599858 1437 ntBASIC24.29■■□□□ 1.48
PIK3C2AO00443 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PIK3C2AO00443 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC24.29■■□□□ 1.48
PIK3C2AO00443 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PIK3C2AO00443 RPS2P28-201ENST00000314255 741 ntBASIC24.28■■□□□ 1.48
PIK3C2AO00443 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC24.28■■□□□ 1.48
PIK3C2AO00443 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC24.28■■□□□ 1.48
PIK3C2AO00443 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC24.28■■□□□ 1.48
PIK3C2AO00443 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC24.28■■□□□ 1.48
PIK3C2AO00443 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PIK3C2AO00443 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC24.28■■□□□ 1.48
PIK3C2AO00443 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
PIK3C2AO00443 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PIK3C2AO00443 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC24.28■■□□□ 1.48
PIK3C2AO00443 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC24.28■■□□□ 1.48
PIK3C2AO00443 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PIK3C2AO00443 SOD2-201ENST00000337404 991 ntTSL 2 BASIC24.27■■□□□ 1.48
PIK3C2AO00443 RPSAP43-201ENST00000402237 625 ntBASIC24.27■■□□□ 1.48
PIK3C2AO00443 UNC93B6-202ENST00000528242 690 ntBASIC24.27■■□□□ 1.48
PIK3C2AO00443 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PIK3C2AO00443 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PIK3C2AO00443 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
PIK3C2AO00443 AD001527.2-201ENST00000622994 785 ntBASIC24.27■■□□□ 1.48
PIK3C2AO00443 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC24.27■■□□□ 1.48
PIK3C2AO00443 GMCL1P1-201ENST00000463439 1581 ntBASIC24.27■■□□□ 1.48
PIK3C2AO00443 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms