Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 AC006116.8-202ENST00000587620 1550 ntBASIC16.13■□□□□ 0.17
NPIPB4C9JG80 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 HLA-F-220ENST00000434407 884 ntBASIC16.12■□□□□ 0.17
NPIPB4C9JG80 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.12■□□□□ 0.17
NPIPB4C9JG80 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 AL441883.1-201ENST00000566170 1045 ntBASIC16.12■□□□□ 0.17
NPIPB4C9JG80 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 AL136038.4-201ENST00000603606 1261 ntBASIC16.12■□□□□ 0.17
NPIPB4C9JG80 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 AL133373.2-201ENST00000623187 2828 ntBASIC16.12■□□□□ 0.17
NPIPB4C9JG80 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NPIPB4C9JG80 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPB4C9JG80 AL391807.1-203ENST00000604392 2365 ntBASIC16.11■□□□□ 0.17
NPIPB4C9JG80 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPB4C9JG80 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPB4C9JG80 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPB4C9JG80 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPB4C9JG80 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPB4C9JG80 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPB4C9JG80 KRT18P65-201ENST00000439811 1286 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms