Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 HBZP1-201ENST00000354915 429 ntBASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 AC100803.2-201ENST00000562459 1963 ntBASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 AK4P3-201ENST00000418260 669 ntBASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 SPDYE13P-201ENST00000445314 798 ntBASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 HOMER2P1-201ENST00000455653 964 ntBASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV5S1A1TA0A578 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 MIR662-201ENST00000384847 95 ntBASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 AC063952.2-201ENST00000498792 1227 ntBASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 RN7SL850P-201ENST00000579959 291 ntBASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 GNAS-203ENST00000306120 1878 ntBASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 LETM1P2-201ENST00000597330 2178 ntBASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV5S1A1TA0A578 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 AL359075.1-203ENST00000462729 1002 ntBASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TCRBV5S1A1TA0A578 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms