Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 AP005117.1-201ENST00000584346 1413 ntBASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 AC125634.1-201ENST00000438758 1403 ntBASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 SDHAP2-201ENST00000455183 2001 ntBASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 ABCD1P5-201ENST00000445663 754 ntBASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC187A0A096LP49 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 FAM220CP-201ENST00000395253 831 ntBASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 AC021087.4-201ENST00000563761 564 ntBASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 AC145285.3-201ENST00000564603 959 ntBASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC187A0A096LP49 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC187A0A096LP49 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC187A0A096LP49 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC187A0A096LP49 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms