Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHAC2Q9Y5I4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHAC2Q9Y5I4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHAC2Q9Y5I4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDHAC2Q9Y5I4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHAC2Q9Y5I4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHAC2Q9Y5I4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHAC2Q9Y5I4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
PCDHAC2Q9Y5I4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHAC2Q9Y5I4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHAC2Q9Y5I4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 MIR1233-2-201ENST00000408138 82 ntBASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 MIR1233-1-201ENST00000408722 82 ntBASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 AC092910.1-201ENST00000482027 1129 ntBASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 AC055717.3-201ENST00000622967 595 ntBASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDHAC2Q9Y5I4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 BX842568.4-201ENST00000421222 227 ntBASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 AC034105.1-201ENST00000563488 319 ntBASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 AC008687.5-201ENST00000593746 558 ntBASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC2Q9Y5I4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 AC098831.1-202ENST00000438821 336 ntBASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 AC092183.1-201ENST00000469884 875 ntBASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 AC145285.3-201ENST00000564603 959 ntBASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 AC140113.2-201ENST00000604370 208 ntBASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 ZNF259P1-201ENST00000407656 1365 ntBASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHAC2Q9Y5I4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PCDHAC2Q9Y5I4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms