Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 AL499627.1-201ENST00000569373 2188 ntBASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 AC099343.3-201ENST00000605834 2503 ntBASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 AC026396.1-201ENST00000419388 421 ntBASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB2Q9Y5E7 AC112777.1-201ENST00000540175 1423 ntBASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 UNC93B7-201ENST00000509439 705 ntBASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 GUSBP12-201ENST00000513727 720 ntBASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 AC012615.1-201ENST00000565797 1299 ntBASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 AL592071.1-201ENST00000611956 408 ntBASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 AC124864.1-201ENST00000623408 392 ntBASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB2Q9Y5E7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 AC009102.3-201ENST00000623118 1491 ntBASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 MYLKP1-201ENST00000509077 1580 ntBASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 RN7SL606P-201ENST00000472779 293 ntBASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 AC126763.1-201ENST00000552015 2118 ntBASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 RN7SL510P-201ENST00000581311 263 ntBASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB2Q9Y5E7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms