Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 MIR770-201ENST00000390219 98 ntBASIC19.27■□□□□ 0.68
CHD7Q9P2D1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 AC092364.2-202ENST00000597012 1073 ntBASIC19.27■□□□□ 0.68
CHD7Q9P2D1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 AC141586.3-201ENST00000562166 1838 ntBASIC19.27■□□□□ 0.68
CHD7Q9P2D1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 PMPCAP1-201ENST00000508114 1576 ntBASIC19.27■□□□□ 0.68
CHD7Q9P2D1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.27■□□□□ 0.67
CHD7Q9P2D1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CHD7Q9P2D1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHD7Q9P2D1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHD7Q9P2D1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CHD7Q9P2D1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.26■□□□□ 0.67
CHD7Q9P2D1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 LINC00602-201ENST00000629776 2065 ntBASIC19.26■□□□□ 0.67
CHD7Q9P2D1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHD7Q9P2D1 AC064836.3-201ENST00000607928 673 ntBASIC19.26■□□□□ 0.67
CHD7Q9P2D1 AC009154.2-201ENST00000621177 724 ntBASIC19.26■□□□□ 0.67
CHD7Q9P2D1 MIR1199-201ENST00000621445 119 ntBASIC19.26■□□□□ 0.67
CHD7Q9P2D1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 COX20P2-201ENST00000452636 358 ntBASIC19.25■□□□□ 0.67
CHD7Q9P2D1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD7Q9P2D1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 AC068587.9-201ENST00000641814 219 ntBASIC19.24■□□□□ 0.67
CHD7Q9P2D1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 AL032819.2-201ENST00000624543 2162 ntBASIC19.24■□□□□ 0.67
CHD7Q9P2D1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CHD7Q9P2D1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms