Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
NLRC4Q9NPP4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC4Q9NPP4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC4Q9NPP4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC4Q9NPP4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC4Q9NPP4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC4Q9NPP4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.81■□□□□ 0.76
NLRC4Q9NPP4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NLRC4Q9NPP4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
NLRC4Q9NPP4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC4Q9NPP4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC4Q9NPP4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 MIR149-201ENST00000384879 89 ntBASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 AC007663.1-201ENST00000438948 1240 ntBASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 CCR12P-201ENST00000446203 998 ntBASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NLRC4Q9NPP4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 WWOX-216ENST00000569818 525 ntBASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 FLJ13224-201ENST00000313737 1514 ntBASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLRC4Q9NPP4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 INGX-201ENST00000359239 846 ntBASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 TSPY15P-201ENST00000457163 923 ntBASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 BX088651.1-201ENST00000540551 451 ntBASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 AC116562.4-202ENST00000641738 218 ntBASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.78■□□□□ 0.76
NLRC4Q9NPP4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.77■□□□□ 0.76
NLRC4Q9NPP4 C2orf69P3-201ENST00000565542 1120 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms