Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 MTND1P4-201ENST00000435196 415 ntBASIC20.31■□□□□ 0.84
RNF39Q9H2S5 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 AC005730.2-201ENST00000564549 1184 ntBASIC20.31■□□□□ 0.84
RNF39Q9H2S5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 AC099786.3-201ENST00000565735 1410 ntBASIC20.3■□□□□ 0.84
RNF39Q9H2S5 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 CFTRP3-201ENST00000376400 212 ntBASIC20.3■□□□□ 0.84
RNF39Q9H2S5 SNORA40.4-201ENST00000390971 128 ntBASIC20.3■□□□□ 0.84
RNF39Q9H2S5 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 AC022784.5-201ENST00000522241 437 ntBASIC20.3■□□□□ 0.84
RNF39Q9H2S5 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.3■□□□□ 0.84
RNF39Q9H2S5 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC20.3■□□□□ 0.84
RNF39Q9H2S5 AC079602.3-201ENST00000623931 403 ntBASIC20.3■□□□□ 0.84
RNF39Q9H2S5 AL157888.1-201ENST00000631930 593 ntBASIC20.3■□□□□ 0.84
RNF39Q9H2S5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF39Q9H2S5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 MIR564-202ENST00000385049 94 ntBASIC20.29■□□□□ 0.84
RNF39Q9H2S5 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 MORF4L1P7-201ENST00000426038 703 ntBASIC20.29■□□□□ 0.84
RNF39Q9H2S5 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.29■□□□□ 0.84
RNF39Q9H2S5 AL360268.1-201ENST00000453870 765 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 AC111000.5-201ENST00000506559 1178 ntBASIC20.29■□□□□ 0.84
RNF39Q9H2S5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 AP005136.2-201ENST00000583253 1049 ntBASIC20.29■□□□□ 0.84
RNF39Q9H2S5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 AL096803.3-201ENST00000609032 532 ntBASIC20.29■□□□□ 0.84
RNF39Q9H2S5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 AC093458.2-201ENST00000623150 629 ntBASIC20.29■□□□□ 0.84
RNF39Q9H2S5 AC098679.4-201ENST00000624241 654 ntBASIC20.29■□□□□ 0.84
RNF39Q9H2S5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 AC090568.2-206ENST00000521936 1469 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RNF39Q9H2S5 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 EMC4-202ENST00000267750 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms