Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC026366.1-201ENST00000488803 879 ntBASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 AL355312.1-201ENST00000407115 2176 ntBASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 AL023806.1-201ENST00000603994 1649 ntBASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 AC034236.2-201ENST00000606662 1610 ntBASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 LINC01126-201ENST00000623515 1646 ntBASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 AL158211.2-201ENST00000607282 395 ntBASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 AC110285.5-201ENST00000611501 352 ntBASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP3-1Q9BYR8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms