Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.82■□□□□ 0.44
EBF4Q9BQW3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF4Q9BQW3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF4Q9BQW3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EBF4Q9BQW3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.82■□□□□ 0.44
EBF4Q9BQW3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
EBF4Q9BQW3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EBF4Q9BQW3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF4Q9BQW3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 SDHAP2-201ENST00000455183 2001 ntBASIC17.81■□□□□ 0.44
EBF4Q9BQW3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.81■□□□□ 0.44
EBF4Q9BQW3 AL023806.1-201ENST00000603994 1649 ntBASIC17.81■□□□□ 0.44
EBF4Q9BQW3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 MIR564-202ENST00000385049 94 ntBASIC17.81■□□□□ 0.44
EBF4Q9BQW3 AC004951.3-201ENST00000418645 1148 ntBASIC17.81■□□□□ 0.44
EBF4Q9BQW3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.81■□□□□ 0.44
EBF4Q9BQW3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 LINC00602-201ENST00000629776 2065 ntBASIC17.81■□□□□ 0.44
EBF4Q9BQW3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.81■□□□□ 0.44
EBF4Q9BQW3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.8■□□□□ 0.44
EBF4Q9BQW3 RPS2P4-201ENST00000476944 856 ntBASIC17.8■□□□□ 0.44
EBF4Q9BQW3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 KRT18P55-202ENST00000578578 1546 ntBASIC17.8■□□□□ 0.44
EBF4Q9BQW3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
EBF4Q9BQW3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 AC239809.2-201ENST00000415381 517 ntBASIC17.79■□□□□ 0.44
EBF4Q9BQW3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EBF4Q9BQW3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms