Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 DUTP2-201ENST00000519164 463 ntBASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 AP000997.3-201ENST00000623333 2250 ntBASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 AL031432.5-201ENST00000641059 760 ntBASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VCPIP1Q96JH7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 KRT18P55-202ENST00000578578 1546 ntBASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCPIP1Q96JH7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VCPIP1Q96JH7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms