Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 AC098934.4-201ENST00000564127 592 ntBASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.39■□□□□ 0.54
CHMP6Q96FZ7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.39■□□□□ 0.54
CHMP6Q96FZ7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
CHMP6Q96FZ7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 AL355802.2-201ENST00000402069 882 ntBASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 AL121906.2-201ENST00000621597 723 ntBASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP6Q96FZ7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 AC104771.1-201ENST00000603335 964 ntBASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 MYLKP1-201ENST00000509077 1580 ntBASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP6Q96FZ7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 AC133041.1-202ENST00000642053 222 ntBASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CHMP6Q96FZ7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms