Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A3Q93084 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A3Q93084 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.23■□□□□ 0.67
ATP2A3Q93084 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A3Q93084 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
ATP2A3Q93084 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ATP2A3Q93084 AC016734.2-201ENST00000624325 1377 ntBASIC19.22■□□□□ 0.67
ATP2A3Q93084 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ATP2A3Q93084 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.22■□□□□ 0.67
ATP2A3Q93084 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP2A3Q93084 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP2A3Q93084 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.22■□□□□ 0.67
ATP2A3Q93084 AC104390.1-201ENST00000555663 520 ntBASIC19.22■□□□□ 0.67
ATP2A3Q93084 MIR3652-201ENST00000579335 131 ntBASIC19.22■□□□□ 0.67
ATP2A3Q93084 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP2A3Q93084 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP2A3Q93084 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A3Q93084 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ATP2A3Q93084 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ATP2A3Q93084 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
ATP2A3Q93084 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A3Q93084 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A3Q93084 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A3Q93084 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A3Q93084 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A3Q93084 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A3Q93084 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 KRT8P26-201ENST00000534154 1276 ntBASIC19.21■□□□□ 0.67
ATP2A3Q93084 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A3Q93084 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A3Q93084 Z98044.1-201ENST00000632503 1764 ntBASIC19.21■□□□□ 0.67
ATP2A3Q93084 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A3Q93084 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A3Q93084 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A3Q93084 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A3Q93084 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A3Q93084 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 MIR662-201ENST00000384847 95 ntBASIC19.2■□□□□ 0.66
ATP2A3Q93084 MIR564-202ENST00000385049 94 ntBASIC19.2■□□□□ 0.66
ATP2A3Q93084 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 PRELID1P1-202ENST00000567272 903 ntBASIC19.2■□□□□ 0.66
ATP2A3Q93084 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 AC010240.3-201ENST00000607688 395 ntBASIC19.2■□□□□ 0.66
ATP2A3Q93084 AC012313.10-201ENST00000623509 926 ntBASIC19.2■□□□□ 0.66
ATP2A3Q93084 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 KRT8P32-201ENST00000512863 1461 ntBASIC19.2■□□□□ 0.66
ATP2A3Q93084 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.2■□□□□ 0.66
ATP2A3Q93084 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms