Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
TRIM41Q8WV44 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC31.19■■■□□ 2.58
TRIM41Q8WV44 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC31.19■■■□□ 2.58
TRIM41Q8WV44 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
TRIM41Q8WV44 WDR6-223ENST00000627177 207 ntTSL 2 BASIC31.19■■■□□ 2.58
TRIM41Q8WV44 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
TRIM41Q8WV44 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
TRIM41Q8WV44 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC31.19■■■□□ 2.58
TRIM41Q8WV44 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TRIM41Q8WV44 AL163051.1-201ENST00000569214 1512 ntBASIC31.19■■■□□ 2.58
TRIM41Q8WV44 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
TRIM41Q8WV44 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
TRIM41Q8WV44 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRIM41Q8WV44 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRIM41Q8WV44 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC31.17■■■□□ 2.58
TRIM41Q8WV44 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRIM41Q8WV44 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
TRIM41Q8WV44 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC31.17■■■□□ 2.58
TRIM41Q8WV44 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRIM41Q8WV44 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
TRIM41Q8WV44 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC31.16■■■□□ 2.58
TRIM41Q8WV44 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TRIM41Q8WV44 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TRIM41Q8WV44 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
TRIM41Q8WV44 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
TRIM41Q8WV44 DUX4L17-201ENST00000557360 1267 ntBASIC31.16■■■□□ 2.58
TRIM41Q8WV44 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC31.16■■■□□ 2.58
TRIM41Q8WV44 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
TRIM41Q8WV44 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
TRIM41Q8WV44 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 IMP4-203ENST00000409935 958 ntTSL 5 BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 REEP1-209ENST00000541910 969 ntTSL 2 BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 AC106028.4-201ENST00000614509 607 ntBASIC31.15■■■□□ 2.58
TRIM41Q8WV44 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC31.15■■■□□ 2.58
TRIM41Q8WV44 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 AL645939.2-201ENST00000427340 991 ntBASIC31.14■■■□□ 2.58
TRIM41Q8WV44 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 RNF126P1-202ENST00000569893 925 ntBASIC31.14■■■□□ 2.58
TRIM41Q8WV44 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 FAM197Y3-203ENST00000618346 717 ntBASIC31.14■■■□□ 2.58
TRIM41Q8WV44 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRIM41Q8WV44 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC31.14■■■□□ 2.57
TRIM41Q8WV44 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC31.14■■■□□ 2.57
TRIM41Q8WV44 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TRIM41Q8WV44 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
TRIM41Q8WV44 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC31.13■■■□□ 2.57
TRIM41Q8WV44 LITAF-220ENST00000620789 692 ntTSL 5 BASIC31.13■■■□□ 2.57
TRIM41Q8WV44 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TRIM41Q8WV44 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 AC092474.2-201ENST00000424288 719 ntBASIC31.12■■■□□ 2.57
TRIM41Q8WV44 TAF8-206ENST00000472818 719 ntTSL 2 BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 FICD-205ENST00000552758 603 ntTSL 2 BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 TK1-205ENST00000590862 642 ntTSL 3 BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRIM41Q8WV44 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 UROS-202ENST00000368778 1556 ntTSL 2 BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms