Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 Z85996.1-201ENST00000494644 937 ntBASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 HLA-B-256ENST00000639848 1089 ntBASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH3Q8TBE1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 CDCA4P2-201ENST00000441182 718 ntBASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 KRT18P41-201ENST00000518924 1277 ntBASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 SOX15-203ENST00000570788 1093 ntBASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 AL137784.2-201ENST00000607332 1000 ntBASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH3Q8TBE1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH3Q8TBE1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH3Q8TBE1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH3Q8TBE1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH3Q8TBE1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CNIH3Q8TBE1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH3Q8TBE1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms