Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SLC25A1P1-201ENST00000528351 927 ntBASIC22.4■■□□□ 1.18
RTL9Q8NET4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.4■■□□□ 1.18
RTL9Q8NET4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC22.4■■□□□ 1.18
RTL9Q8NET4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.4■■□□□ 1.18
RTL9Q8NET4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.4■■□□□ 1.18
RTL9Q8NET4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RTL9Q8NET4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RTL9Q8NET4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RTL9Q8NET4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RTL9Q8NET4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC22.4■■□□□ 1.18
RTL9Q8NET4 INTS4P1-201ENST00000438455 1935 ntBASIC22.4■■□□□ 1.18
RTL9Q8NET4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.4■■□□□ 1.18
RTL9Q8NET4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RTL9Q8NET4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.4■■□□□ 1.18
RTL9Q8NET4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.4■■□□□ 1.18
RTL9Q8NET4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTL9Q8NET4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RTL9Q8NET4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RTL9Q8NET4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.18
RTL9Q8NET4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RTL9Q8NET4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
RTL9Q8NET4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC22.39■■□□□ 1.18
RTL9Q8NET4 AF228730.7-201ENST00000641842 219 ntBASIC22.39■■□□□ 1.18
RTL9Q8NET4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.39■■□□□ 1.18
RTL9Q8NET4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC22.39■■□□□ 1.18
RTL9Q8NET4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
RTL9Q8NET4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
RTL9Q8NET4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTL9Q8NET4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
RTL9Q8NET4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTL9Q8NET4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RTL9Q8NET4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTL9Q8NET4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RTL9Q8NET4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
RTL9Q8NET4 IL9RP2-201ENST00000423948 1312 ntBASIC22.39■■□□□ 1.17
RTL9Q8NET4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTL9Q8NET4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RTL9Q8NET4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
RTL9Q8NET4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTL9Q8NET4 MIR574-201ENST00000385209 96 ntBASIC22.38■■□□□ 1.17
RTL9Q8NET4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 RBM17P3-201ENST00000417687 1192 ntBASIC22.38■■□□□ 1.17
RTL9Q8NET4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 MOK-208ENST00000519058 917 ntTSL 2 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.38■■□□□ 1.17
RTL9Q8NET4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTL9Q8NET4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
RTL9Q8NET4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RTL9Q8NET4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RTL9Q8NET4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTL9Q8NET4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.37■■□□□ 1.17
RTL9Q8NET4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTL9Q8NET4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTL9Q8NET4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.37■■□□□ 1.17
RTL9Q8NET4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTL9Q8NET4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RTL9Q8NET4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
RTL9Q8NET4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTL9Q8NET4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTL9Q8NET4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
RTL9Q8NET4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTL9Q8NET4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.37■■□□□ 1.17
RTL9Q8NET4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
RTL9Q8NET4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC22.37■■□□□ 1.17
RTL9Q8NET4 AC008608.2-201ENST00000606089 416 ntBASIC22.37■■□□□ 1.17
RTL9Q8NET4 AL355877.3-201ENST00000622820 899 ntBASIC22.37■■□□□ 1.17
RTL9Q8NET4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
RTL9Q8NET4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTL9Q8NET4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL9Q8NET4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL9Q8NET4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RTL9Q8NET4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL9Q8NET4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.36■■□□□ 1.17
RTL9Q8NET4 GMCL1P1-201ENST00000463439 1581 ntBASIC22.36■■□□□ 1.17
RTL9Q8NET4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RTL9Q8NET4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms