Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 AC012618.2-201ENST00000428058 849 ntBASIC18.96■□□□□ 0.63
CCDC89Q8N998 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 AL355355.2-201ENST00000442321 338 ntBASIC18.96■□□□□ 0.63
CCDC89Q8N998 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 AC098590.1-201ENST00000468126 897 ntBASIC18.96■□□□□ 0.63
CCDC89Q8N998 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC89Q8N998 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC89Q8N998 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC89Q8N998 MIR3180-5-201ENST00000583743 153 ntBASIC18.96■□□□□ 0.63
CCDC89Q8N998 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.96■□□□□ 0.63
CCDC89Q8N998 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC89Q8N998 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC89Q8N998 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC89Q8N998 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC89Q8N998 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC89Q8N998 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC89Q8N998 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC89Q8N998 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.62
CCDC89Q8N998 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 KRT8P50-201ENST00000562022 1438 ntBASIC18.95■□□□□ 0.62
CCDC89Q8N998 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 REXO1L10P-201ENST00000615707 1290 ntBASIC18.95■□□□□ 0.62
CCDC89Q8N998 REXO1L12P-201ENST00000622156 912 ntBASIC18.95■□□□□ 0.62
CCDC89Q8N998 AC113410.3-201ENST00000623366 203 ntBASIC18.95■□□□□ 0.62
CCDC89Q8N998 AL049637.2-201ENST00000641778 930 ntBASIC18.95■□□□□ 0.62
CCDC89Q8N998 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC89Q8N998 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC89Q8N998 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC89Q8N998 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CCDC89Q8N998 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC89Q8N998 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC89Q8N998 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC89Q8N998 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC89Q8N998 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC89Q8N998 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC89Q8N998 GCSHP5-201ENST00000443090 522 ntBASIC18.94■□□□□ 0.62
CCDC89Q8N998 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC89Q8N998 AC233702.5-201ENST00000584107 538 ntBASIC18.94■□□□□ 0.62
CCDC89Q8N998 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC89Q8N998 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC89Q8N998 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC89Q8N998 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC89Q8N998 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms