Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC28.41■■■□□ 2.14
VPS8Q8N3P4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC28.41■■■□□ 2.14
VPS8Q8N3P4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC28.41■■■□□ 2.14
VPS8Q8N3P4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC28.41■■■□□ 2.14
VPS8Q8N3P4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
VPS8Q8N3P4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC28.41■■■□□ 2.14
VPS8Q8N3P4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 FOSL1P1-201ENST00000511041 816 ntBASIC28.4■■■□□ 2.14
VPS8Q8N3P4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC28.4■■■□□ 2.14
VPS8Q8N3P4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
VPS8Q8N3P4 AC125634.1-201ENST00000438758 1403 ntBASIC28.4■■■□□ 2.14
VPS8Q8N3P4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 FICD-205ENST00000552758 603 ntTSL 2 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 AC114341.1-201ENST00000618070 349 ntBASIC28.39■■■□□ 2.14
VPS8Q8N3P4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC28.39■■■□□ 2.14
VPS8Q8N3P4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
VPS8Q8N3P4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
VPS8Q8N3P4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
VPS8Q8N3P4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
VPS8Q8N3P4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
VPS8Q8N3P4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
VPS8Q8N3P4 AC104581.1-202ENST00000635932 2618 ntBASIC28.38■■■□□ 2.13
VPS8Q8N3P4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
VPS8Q8N3P4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
VPS8Q8N3P4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
VPS8Q8N3P4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC28.38■■■□□ 2.13
VPS8Q8N3P4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
VPS8Q8N3P4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC28.38■■■□□ 2.13
VPS8Q8N3P4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
VPS8Q8N3P4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
VPS8Q8N3P4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
VPS8Q8N3P4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 UNC93B7-201ENST00000509439 705 ntBASIC28.37■■■□□ 2.13
VPS8Q8N3P4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
VPS8Q8N3P4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 AKR1C7P-201ENST00000305623 895 ntBASIC28.36■■■□□ 2.13
VPS8Q8N3P4 KRT18P31-201ENST00000506277 1292 ntBASIC28.36■■■□□ 2.13
VPS8Q8N3P4 AC096582.2-201ENST00000510860 516 ntBASIC28.36■■■□□ 2.13
VPS8Q8N3P4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 AC111152.3-201ENST00000569699 673 ntBASIC28.36■■■□□ 2.13
VPS8Q8N3P4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 AL121894.2-201ENST00000602977 491 ntBASIC28.36■■■□□ 2.13
VPS8Q8N3P4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
VPS8Q8N3P4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms