Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 AC097374.2-201ENST00000618617 1306 ntBASIC15.32■□□□□ 0.04
CSMD2Q7Z408 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 GK-202ENST00000378941 458 ntTSL 3 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 AC005225.4-201ENST00000557330 545 ntBASIC15.31■□□□□ 0.04
CSMD2Q7Z408 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 KRT8P32-201ENST00000512863 1461 ntBASIC15.31■□□□□ 0.04
CSMD2Q7Z408 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.31■□□□□ 0.04
CSMD2Q7Z408 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 AJ011932.1-201ENST00000621707 465 ntBASIC15.31■□□□□ 0.04
CSMD2Q7Z408 FP475955.4-201ENST00000623131 1990 ntBASIC15.31■□□□□ 0.04
CSMD2Q7Z408 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 Z98044.1-201ENST00000632503 1764 ntBASIC15.31■□□□□ 0.04
CSMD2Q7Z408 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 AC068472.1-201ENST00000474589 881 ntBASIC15.31■□□□□ 0.04
CSMD2Q7Z408 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 AC087641.1-201ENST00000557561 1021 ntBASIC15.31■□□□□ 0.04
CSMD2Q7Z408 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 AC073592.4-201ENST00000623827 446 ntBASIC15.31■□□□□ 0.04
CSMD2Q7Z408 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.31■□□□□ 0.04
CSMD2Q7Z408 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 AC002472.2-201ENST00000442739 958 ntBASIC15.3■□□□□ 0.04
CSMD2Q7Z408 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 GPR89P-201ENST00000407924 1495 ntBASIC15.3■□□□□ 0.04
CSMD2Q7Z408 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 AC109322.1-201ENST00000524499 1264 ntBASIC15.3■□□□□ 0.04
CSMD2Q7Z408 DUX4L17-201ENST00000557360 1267 ntBASIC15.3■□□□□ 0.04
CSMD2Q7Z408 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.3■□□□□ 0.04
CSMD2Q7Z408 AC113404.2-201ENST00000507884 177 ntBASIC15.3■□□□□ 0.04
CSMD2Q7Z408 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.3■□□□□ 0.04
CSMD2Q7Z408 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CSMD2Q7Z408 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSMD2Q7Z408 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.29■□□□□ 0.04
CSMD2Q7Z408 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms