Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 FLJ13224-201ENST00000313737 1514 ntBASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 TMPOP1-202ENST00000424642 1267 ntBASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 HLA-F-220ENST00000434407 884 ntBASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 AC063952.2-201ENST00000498792 1227 ntBASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 AC113404.2-201ENST00000507884 177 ntBASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 LINC01238-205ENST00000567549 1107 ntBASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 RN7SL850P-201ENST00000579959 291 ntBASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 AC024563.2-201ENST00000603282 481 ntBASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 AC079602.3-201ENST00000623931 403 ntBASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TMEM35AQ53FP2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.33■□□□□ 0.37
TMEM35AQ53FP2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM35AQ53FP2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM35AQ53FP2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM35AQ53FP2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM35AQ53FP2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TMEM35AQ53FP2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM35AQ53FP2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM35AQ53FP2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM35AQ53FP2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM35AQ53FP2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 REXO1L9P-201ENST00000604264 2108 ntBASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35AQ53FP2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 AC138028.4-201ENST00000564984 1845 ntBASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TMEM35AQ53FP2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35AQ53FP2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35AQ53FP2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35AQ53FP2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35AQ53FP2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35AQ53FP2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
TMEM35AQ53FP2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM35AQ53FP2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35AQ53FP2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms