Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO1Q2MKA7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 AC134043.2-201ENST00000624206 2238 ntBASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO1Q2MKA7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 LINC00167-201ENST00000530583 1419 ntBASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 AL391807.1-203ENST00000604392 2365 ntBASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 STARP1-201ENST00000397973 869 ntBASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 SPDYE15P-201ENST00000424157 909 ntBASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 AC034232.1-201ENST00000506026 1064 ntBASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 DUTP2-201ENST00000519164 463 ntBASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 LINC01023-201ENST00000606054 436 ntBASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 AC006011.2-201ENST00000621313 1158 ntBASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RSPO1Q2MKA7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO1Q2MKA7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO1Q2MKA7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO1Q2MKA7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.77■□□□□ 0.12
RSPO1Q2MKA7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms