Protein–RNA interactions for Protein: Q02880

TOP2B, DNA topoisomerase 2-beta, humanhuman

Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2BQ02880 SIGLEC16-201ENST00000599858 1437 ntBASIC30.3■■■□□ 2.44
TOP2BQ02880 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
TOP2BQ02880 YBX2P1-201ENST00000394192 760 ntBASIC30.29■■■□□ 2.44
TOP2BQ02880 RPSAP43-201ENST00000402237 625 ntBASIC30.29■■■□□ 2.44
TOP2BQ02880 AC096633.1-201ENST00000422446 749 ntBASIC30.29■■■□□ 2.44
TOP2BQ02880 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
TOP2BQ02880 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC30.29■■■□□ 2.44
TOP2BQ02880 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC30.29■■■□□ 2.44
TOP2BQ02880 PMPCAP1-201ENST00000508114 1576 ntBASIC30.29■■■□□ 2.44
TOP2BQ02880 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC30.29■■■□□ 2.44
TOP2BQ02880 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC30.29■■■□□ 2.44
TOP2BQ02880 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
TOP2BQ02880 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC30.29■■■□□ 2.44
TOP2BQ02880 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC30.29■■■□□ 2.44
TOP2BQ02880 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
TOP2BQ02880 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
TOP2BQ02880 HOTTIP_1.1-201ENST00000620415 57 ntBASIC30.29■■■□□ 2.44
TOP2BQ02880 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC30.29■■■□□ 2.44
TOP2BQ02880 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2BQ02880 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2BQ02880 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC30.28■■■□□ 2.44
TOP2BQ02880 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
TOP2BQ02880 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2BQ02880 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.28■■■□□ 2.44
TOP2BQ02880 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2BQ02880 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2BQ02880 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2BQ02880 AC073621.1-201ENST00000392730 636 ntBASIC30.28■■■□□ 2.44
TOP2BQ02880 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC30.28■■■□□ 2.44
TOP2BQ02880 AC005104.2-201ENST00000427818 678 ntBASIC30.28■■■□□ 2.44
TOP2BQ02880 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC30.28■■■□□ 2.44
TOP2BQ02880 HS6ST1P1-201ENST00000481504 1234 ntBASIC30.28■■■□□ 2.44
TOP2BQ02880 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC30.28■■■□□ 2.44
TOP2BQ02880 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2BQ02880 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2BQ02880 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC30.27■■■□□ 2.44
TOP2BQ02880 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2BQ02880 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2BQ02880 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2BQ02880 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC30.27■■■□□ 2.44
TOP2BQ02880 IMP4-203ENST00000409935 958 ntTSL 5 BASIC30.27■■■□□ 2.44
TOP2BQ02880 UPF3AP3-201ENST00000420996 769 ntBASIC30.27■■■□□ 2.44
TOP2BQ02880 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC30.27■■■□□ 2.44
TOP2BQ02880 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2BQ02880 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2BQ02880 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC30.26■■■□□ 2.44
TOP2BQ02880 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC30.26■■■□□ 2.44
TOP2BQ02880 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC30.26■■■□□ 2.44
TOP2BQ02880 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC30.26■■■□□ 2.44
TOP2BQ02880 UNC93B6-202ENST00000528242 690 ntBASIC30.26■■■□□ 2.44
TOP2BQ02880 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC30.26■■■□□ 2.44
TOP2BQ02880 AD001527.2-201ENST00000622994 785 ntBASIC30.26■■■□□ 2.44
TOP2BQ02880 CAND2-206ENST00000626378 333 ntTSL 5 BASIC30.26■■■□□ 2.44
TOP2BQ02880 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC30.26■■■□□ 2.43
TOP2BQ02880 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC30.26■■■□□ 2.43
TOP2BQ02880 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC30.26■■■□□ 2.43
TOP2BQ02880 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOP2BQ02880 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
TOP2BQ02880 AC093010.1-201ENST00000473625 1624 ntBASIC30.26■■■□□ 2.43
TOP2BQ02880 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOP2BQ02880 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC30.26■■■□□ 2.43
TOP2BQ02880 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC30.26■■■□□ 2.43
TOP2BQ02880 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC30.25■■■□□ 2.43
TOP2BQ02880 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC30.25■■■□□ 2.43
TOP2BQ02880 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC30.25■■■□□ 2.43
TOP2BQ02880 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC30.25■■■□□ 2.43
TOP2BQ02880 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC30.25■■■□□ 2.43
TOP2BQ02880 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TOP2BQ02880 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC30.25■■■□□ 2.43
TOP2BQ02880 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
TOP2BQ02880 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
TOP2BQ02880 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC30.25■■■□□ 2.43
TOP2BQ02880 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
TOP2BQ02880 MIR940-201ENST00000401276 94 ntBASIC30.25■■■□□ 2.43
TOP2BQ02880 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC30.25■■■□□ 2.43
TOP2BQ02880 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC30.25■■■□□ 2.43
TOP2BQ02880 AC009947.1-201ENST00000444350 727 ntBASIC30.25■■■□□ 2.43
TOP2BQ02880 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC30.25■■■□□ 2.43
TOP2BQ02880 AC105339.3-201ENST00000560043 636 ntBASIC30.25■■■□□ 2.43
TOP2BQ02880 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC30.25■■■□□ 2.43
TOP2BQ02880 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TOP2BQ02880 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
TOP2BQ02880 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
TOP2BQ02880 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOP2BQ02880 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOP2BQ02880 AC004832.2-201ENST00000426397 482 ntBASIC30.24■■■□□ 2.43
TOP2BQ02880 AC040169.1-201ENST00000565382 521 ntBASIC30.24■■■□□ 2.43
TOP2BQ02880 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
TOP2BQ02880 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
TOP2BQ02880 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOP2BQ02880 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TOP2BQ02880 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
TOP2BQ02880 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
TOP2BQ02880 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC30.23■■■□□ 2.43
TOP2BQ02880 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TOP2BQ02880 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
TOP2BQ02880 AC007967.2-201ENST00000432613 625 ntBASIC30.23■■■□□ 2.43
TOP2BQ02880 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC30.23■■■□□ 2.43
TOP2BQ02880 SDCCAG3P1-201ENST00000589292 1150 ntBASIC30.23■■■□□ 2.43
TOP2BQ02880 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms