Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.02■□□□□ 0.96
HMGCS2P54868 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.02■□□□□ 0.96
HMGCS2P54868 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.02■□□□□ 0.96
HMGCS2P54868 AC021087.4-201ENST00000563761 564 ntBASIC21.02■□□□□ 0.96
HMGCS2P54868 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.02■□□□□ 0.96
HMGCS2P54868 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.02■□□□□ 0.96
HMGCS2P54868 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.02■□□□□ 0.96
HMGCS2P54868 TERC-201ENST00000602385 541 ntBASIC21.02■□□□□ 0.96
HMGCS2P54868 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.02■□□□□ 0.96
HMGCS2P54868 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HMGCS2P54868 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
HMGCS2P54868 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.01■□□□□ 0.95
HMGCS2P54868 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.01■□□□□ 0.95
HMGCS2P54868 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.01■□□□□ 0.95
HMGCS2P54868 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.01■□□□□ 0.95
HMGCS2P54868 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.01■□□□□ 0.95
HMGCS2P54868 ABCD1P5-201ENST00000445663 754 ntBASIC21.01■□□□□ 0.95
HMGCS2P54868 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.01■□□□□ 0.95
HMGCS2P54868 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.01■□□□□ 0.95
HMGCS2P54868 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.01■□□□□ 0.95
HMGCS2P54868 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.01■□□□□ 0.95
HMGCS2P54868 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.01■□□□□ 0.95
HMGCS2P54868 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.01■□□□□ 0.95
HMGCS2P54868 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 PMS2P7-201ENST00000506558 1336 ntBASIC21.01■□□□□ 0.95
HMGCS2P54868 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCS2P54868 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGCS2P54868 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGCS2P54868 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21■□□□□ 0.95
HMGCS2P54868 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HMGCS2P54868 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21■□□□□ 0.95
HMGCS2P54868 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21■□□□□ 0.95
HMGCS2P54868 ZNF259P1-201ENST00000407656 1365 ntBASIC21■□□□□ 0.95
HMGCS2P54868 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGCS2P54868 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
HMGCS2P54868 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21■□□□□ 0.95
HMGCS2P54868 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
HMGCS2P54868 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21■□□□□ 0.95
HMGCS2P54868 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21■□□□□ 0.95
HMGCS2P54868 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21■□□□□ 0.95
HMGCS2P54868 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21■□□□□ 0.95
HMGCS2P54868 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HMGCS2P54868 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HMGCS2P54868 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGCS2P54868 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGCS2P54868 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21■□□□□ 0.95
HMGCS2P54868 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HMGCS2P54868 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21■□□□□ 0.95
HMGCS2P54868 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21■□□□□ 0.95
HMGCS2P54868 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMGCS2P54868 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMGCS2P54868 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HMGCS2P54868 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMGCS2P54868 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMGCS2P54868 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.99■□□□□ 0.95
HMGCS2P54868 RPS2P28-201ENST00000314255 741 ntBASIC20.99■□□□□ 0.95
HMGCS2P54868 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.99■□□□□ 0.95
HMGCS2P54868 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMGCS2P54868 RPS2P1-201ENST00000434010 821 ntBASIC20.99■□□□□ 0.95
HMGCS2P54868 KRT18P65-201ENST00000439811 1286 ntBASIC20.99■□□□□ 0.95
HMGCS2P54868 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMGCS2P54868 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.99■□□□□ 0.95
HMGCS2P54868 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.99■□□□□ 0.95
HMGCS2P54868 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.99■□□□□ 0.95
HMGCS2P54868 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.99■□□□□ 0.95
HMGCS2P54868 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HMGCS2P54868 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HMGCS2P54868 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
HMGCS2P54868 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMGCS2P54868 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HMGCS2P54868 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.99■□□□□ 0.95
HMGCS2P54868 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.99■□□□□ 0.95
HMGCS2P54868 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.99■□□□□ 0.95
HMGCS2P54868 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGCS2P54868 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGCS2P54868 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HMGCS2P54868 AC116562.4-201ENST00000641316 2276 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms