Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.72■□□□□ 0.75
TNFSF9P41273 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.72■□□□□ 0.75
TNFSF9P41273 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 AC132938.6-201ENST00000623828 1655 ntBASIC19.71■□□□□ 0.75
TNFSF9P41273 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFSF9P41273 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TNFSF9P41273 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFSF9P41273 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TNFSF9P41273 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 HCG4P8-203ENST00000443049 980 ntBASIC19.71■□□□□ 0.75
TNFSF9P41273 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFSF9P41273 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.71■□□□□ 0.75
TNFSF9P41273 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TNFSF9P41273 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.71■□□□□ 0.75
TNFSF9P41273 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF9P41273 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.74
TNFSF9P41273 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFSF9P41273 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TNFSF9P41273 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.7■□□□□ 0.74
TNFSF9P41273 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
TNFSF9P41273 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.7■□□□□ 0.74
TNFSF9P41273 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.7■□□□□ 0.74
TNFSF9P41273 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
TNFSF9P41273 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
TNFSF9P41273 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TNFSF9P41273 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFSF9P41273 AC008687.5-201ENST00000593746 558 ntBASIC19.7■□□□□ 0.74
TNFSF9P41273 AL592071.1-201ENST00000611956 408 ntBASIC19.7■□□□□ 0.74
TNFSF9P41273 IGHV3-41-201ENST00000613121 348 ntBASIC19.7■□□□□ 0.74
TNFSF9P41273 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
TNFSF9P41273 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TNFSF9P41273 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.7■□□□□ 0.74
TNFSF9P41273 KRT18P1-202ENST00000452408 1331 ntBASIC19.7■□□□□ 0.74
TNFSF9P41273 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFSF9P41273 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
TNFSF9P41273 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF9P41273 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF9P41273 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TNFSF9P41273 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFSF9P41273 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFSF9P41273 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TNFSF9P41273 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF9P41273 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFSF9P41273 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF9P41273 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF9P41273 RN7SL606P-201ENST00000472779 293 ntBASIC19.69■□□□□ 0.74
TNFSF9P41273 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF9P41273 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFSF9P41273 TPSP2-201ENST00000561760 610 ntBASIC19.69■□□□□ 0.74
TNFSF9P41273 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
TNFSF9P41273 AC124864.1-201ENST00000623408 392 ntBASIC19.69■□□□□ 0.74
TNFSF9P41273 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFSF9P41273 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF9P41273 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TNFSF9P41273 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
TNFSF9P41273 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TNFSF9P41273 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
TNFSF9P41273 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.68■□□□□ 0.74
TNFSF9P41273 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.68■□□□□ 0.74
TNFSF9P41273 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.68■□□□□ 0.74
TNFSF9P41273 AC090616.6-201ENST00000582640 721 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms