Protein–RNA interactions for Protein: P36954

POLR2I, DNA-directed RNA polymerase II subunit RPB9, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2IP36954 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2IP36954 GMCL1P1-201ENST00000463439 1581 ntBASIC16.82■□□□□ 0.28
POLR2IP36954 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
POLR2IP36954 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR2IP36954 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2IP36954 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR2IP36954 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2IP36954 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2IP36954 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2IP36954 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2IP36954 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.82■□□□□ 0.28
POLR2IP36954 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2IP36954 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.82■□□□□ 0.28
POLR2IP36954 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2IP36954 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2IP36954 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
POLR2IP36954 KRT18P41-201ENST00000518924 1277 ntBASIC16.82■□□□□ 0.28
POLR2IP36954 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2IP36954 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2IP36954 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2IP36954 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
POLR2IP36954 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2IP36954 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2IP36954 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
POLR2IP36954 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2IP36954 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
POLR2IP36954 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2IP36954 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
POLR2IP36954 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2IP36954 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
POLR2IP36954 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR2IP36954 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
POLR2IP36954 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR2IP36954 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR2IP36954 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR2IP36954 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.81■□□□□ 0.28
POLR2IP36954 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR2IP36954 TSPY6P-201ENST00000448518 926 ntBASIC16.81■□□□□ 0.28
POLR2IP36954 UNC93B4-201ENST00000505679 747 ntBASIC16.81■□□□□ 0.28
POLR2IP36954 PRSS44-201ENST00000515154 1146 ntBASIC16.81■□□□□ 0.28
POLR2IP36954 PRKY-204ENST00000533551 1019 ntBASIC16.81■□□□□ 0.28
POLR2IP36954 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
POLR2IP36954 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR2IP36954 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.81■□□□□ 0.28
POLR2IP36954 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 AC004264.1-201ENST00000608354 794 ntBASIC16.81■□□□□ 0.28
POLR2IP36954 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.81■□□□□ 0.28
POLR2IP36954 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
POLR2IP36954 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
POLR2IP36954 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
POLR2IP36954 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
POLR2IP36954 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
POLR2IP36954 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2IP36954 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
POLR2IP36954 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR2IP36954 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR2IP36954 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR2IP36954 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
POLR2IP36954 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
POLR2IP36954 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR2IP36954 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.8■□□□□ 0.28
POLR2IP36954 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.8■□□□□ 0.28
POLR2IP36954 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.8■□□□□ 0.28
POLR2IP36954 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
POLR2IP36954 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR2IP36954 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR2IP36954 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR2IP36954 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR2IP36954 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2IP36954 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
POLR2IP36954 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2IP36954 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2IP36954 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2IP36954 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms