Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN3P26045 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PTPN3P26045 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN3P26045 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN3P26045 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTPN3P26045 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN3P26045 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN3P26045 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN3P26045 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN3P26045 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN3P26045 AL441883.1-201ENST00000566170 1045 ntBASIC18.62■□□□□ 0.57
PTPN3P26045 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.62■□□□□ 0.57
PTPN3P26045 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN3P26045 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN3P26045 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.62■□□□□ 0.57
PTPN3P26045 AC093010.1-201ENST00000473625 1624 ntBASIC18.62■□□□□ 0.57
PTPN3P26045 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN3P26045 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN3P26045 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN3P26045 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN3P26045 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN3P26045 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN3P26045 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PTPN3P26045 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN3P26045 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTPN3P26045 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN3P26045 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN3P26045 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PTPN3P26045 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 AC005521.1-201ENST00000393351 872 ntBASIC18.61■□□□□ 0.57
PTPN3P26045 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPN3P26045 COX11P1-201ENST00000489116 835 ntBASIC18.61■□□□□ 0.57
PTPN3P26045 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN3P26045 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPN3P26045 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN3P26045 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.61■□□□□ 0.57
PTPN3P26045 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN3P26045 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN3P26045 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTPN3P26045 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN3P26045 AC068880.1-201ENST00000507289 2297 ntBASIC18.61■□□□□ 0.57
PTPN3P26045 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN3P26045 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 AC008764.6-201ENST00000595909 2069 ntBASIC18.61■□□□□ 0.57
PTPN3P26045 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN3P26045 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PTPN3P26045 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN3P26045 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PTPN3P26045 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN3P26045 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 PVRIG2P-201ENST00000435460 978 ntBASIC18.6■□□□□ 0.57
PTPN3P26045 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN3P26045 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN3P26045 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN3P26045 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN3P26045 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
PTPN3P26045 AC140113.3-201ENST00000605663 199 ntBASIC18.6■□□□□ 0.57
PTPN3P26045 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PTPN3P26045 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
PTPN3P26045 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN3P26045 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 FLJ13224-201ENST00000313737 1514 ntBASIC18.59■□□□□ 0.57
PTPN3P26045 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN3P26045 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PTPN3P26045 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PTPN3P26045 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.59■□□□□ 0.57
PTPN3P26045 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms