Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CD40P25942 AC104819.1-201ENST00000504587 486 ntBASIC15.72■□□□□ 0.11
CD40P25942 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.72■□□□□ 0.11
CD40P25942 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.72■□□□□ 0.11
CD40P25942 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CD40P25942 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CD40P25942 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.72■□□□□ 0.11
CD40P25942 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD40P25942 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CD40P25942 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CD40P25942 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD40P25942 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD40P25942 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.71■□□□□ 0.11
CD40P25942 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD40P25942 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
CD40P25942 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD40P25942 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD40P25942 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD40P25942 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD40P25942 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.71■□□□□ 0.11
CD40P25942 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.71■□□□□ 0.11
CD40P25942 TSPY12P-201ENST00000421279 868 ntBASIC15.71■□□□□ 0.11
CD40P25942 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.71■□□□□ 0.11
CD40P25942 AC074051.2-201ENST00000565115 352 ntBASIC15.71■□□□□ 0.11
CD40P25942 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.71■□□□□ 0.11
CD40P25942 AC011840.4-201ENST00000578471 627 ntBASIC15.71■□□□□ 0.11
CD40P25942 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.71■□□□□ 0.11
CD40P25942 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD40P25942 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.71■□□□□ 0.11
CD40P25942 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.71■□□□□ 0.11
CD40P25942 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD40P25942 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.71■□□□□ 0.11
CD40P25942 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD40P25942 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.71■□□□□ 0.11
CD40P25942 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.71■□□□□ 0.11
CD40P25942 LINC01126-201ENST00000623515 1646 ntBASIC15.71■□□□□ 0.11
CD40P25942 AP000974.1-201ENST00000623909 2387 ntBASIC15.71■□□□□ 0.11
CD40P25942 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD40P25942 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CD40P25942 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CD40P25942 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CD40P25942 AC246785.2-201ENST00000432512 513 ntBASIC15.7■□□□□ 0.1
CD40P25942 KRT17P6-201ENST00000453795 1220 ntBASIC15.7■□□□□ 0.1
CD40P25942 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.7■□□□□ 0.1
CD40P25942 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.7■□□□□ 0.1
CD40P25942 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CD40P25942 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.7■□□□□ 0.1
CD40P25942 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.7■□□□□ 0.1
CD40P25942 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.7■□□□□ 0.1
CD40P25942 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.7■□□□□ 0.1
CD40P25942 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.7■□□□□ 0.1
CD40P25942 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CD40P25942 AC126763.1-201ENST00000552015 2118 ntBASIC15.7■□□□□ 0.1
CD40P25942 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD40P25942 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.69■□□□□ 0.1
CD40P25942 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CD40P25942 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 LINC00167-201ENST00000530583 1419 ntBASIC15.69■□□□□ 0.1
CD40P25942 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CD40P25942 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
CD40P25942 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CD40P25942 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.69■□□□□ 0.1
CD40P25942 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.69■□□□□ 0.1
CD40P25942 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms