Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH3P22223 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDH3P22223 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH3P22223 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH3P22223 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH3P22223 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.89■□□□□ 0.45
CDH3P22223 AC091076.1-201ENST00000610741 619 ntBASIC17.89■□□□□ 0.45
CDH3P22223 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH3P22223 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH3P22223 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH3P22223 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH3P22223 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH3P22223 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH3P22223 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH3P22223 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH3P22223 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH3P22223 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH3P22223 AC006333.2-201ENST00000607957 2099 ntBASIC17.89■□□□□ 0.45
CDH3P22223 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH3P22223 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH3P22223 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH3P22223 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDH3P22223 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH3P22223 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH3P22223 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH3P22223 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CDH3P22223 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH3P22223 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH3P22223 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDH3P22223 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CDH3P22223 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH3P22223 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH3P22223 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH3P22223 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH3P22223 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.88■□□□□ 0.45
CDH3P22223 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH3P22223 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH3P22223 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH3P22223 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
CDH3P22223 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH3P22223 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH3P22223 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH3P22223 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH3P22223 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CDH3P22223 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CDH3P22223 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH3P22223 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH3P22223 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CDH3P22223 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDH3P22223 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH3P22223 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH3P22223 Z98044.1-201ENST00000632503 1764 ntBASIC17.87■□□□□ 0.45
CDH3P22223 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 AL357033.4-201ENST00000617703 1807 ntBASIC17.87■□□□□ 0.45
CDH3P22223 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CDH3P22223 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDH3P22223 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH3P22223 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH3P22223 VENTXP5-201ENST00000523979 775 ntBASIC17.87■□□□□ 0.45
CDH3P22223 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH3P22223 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH3P22223 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 AC104390.1-201ENST00000555663 520 ntBASIC17.87■□□□□ 0.45
CDH3P22223 ZNF444P1-201ENST00000559497 298 ntBASIC17.87■□□□□ 0.45
CDH3P22223 MIR3917-201ENST00000580971 93 ntBASIC17.87■□□□□ 0.45
CDH3P22223 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 AC083849.1-201ENST00000615227 514 ntBASIC17.87■□□□□ 0.45
CDH3P22223 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH3P22223 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH3P22223 AL157888.1-201ENST00000631930 593 ntBASIC17.87■□□□□ 0.45
CDH3P22223 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 AC083906.6-201ENST00000641366 219 ntBASIC17.87■□□□□ 0.45
CDH3P22223 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDH3P22223 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH3P22223 AC139713.2-201ENST00000641328 2723 ntBASIC17.87■□□□□ 0.45
CDH3P22223 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH3P22223 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH3P22223 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH3P22223 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH3P22223 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH3P22223 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CDH3P22223 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH3P22223 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH3P22223 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH3P22223 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH3P22223 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms