Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF1BP20333 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TNFRSF1BP20333 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF1BP20333 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TNFRSF1BP20333 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.98■□□□□ 0.31
TNFRSF1BP20333 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF1BP20333 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF1BP20333 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.98■□□□□ 0.31
TNFRSF1BP20333 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF1BP20333 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.98■□□□□ 0.31
TNFRSF1BP20333 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF1BP20333 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.97■□□□□ 0.31
TNFRSF1BP20333 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 PP12613-201ENST00000424958 2230 ntBASIC16.97■□□□□ 0.31
TNFRSF1BP20333 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 AC097488.1-201ENST00000507834 756 ntBASIC16.97■□□□□ 0.31
TNFRSF1BP20333 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF1BP20333 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 NUDT16P1-203ENST00000513809 620 ntBASIC16.96■□□□□ 0.31
TNFRSF1BP20333 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 MIR3180-5-201ENST00000583743 153 ntBASIC16.96■□□□□ 0.31
TNFRSF1BP20333 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.96■□□□□ 0.31
TNFRSF1BP20333 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.96■□□□□ 0.31
TNFRSF1BP20333 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TNFRSF1BP20333 AC080080.1-201ENST00000625121 2420 ntBASIC16.96■□□□□ 0.3
TNFRSF1BP20333 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.96■□□□□ 0.3
TNFRSF1BP20333 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 AC116562.2-201ENST00000507042 360 ntBASIC16.95■□□□□ 0.3
TNFRSF1BP20333 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms