Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPN1P18031 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN1P18031 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.29■□□□□ 0.68
PTPN1P18031 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PTPN1P18031 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTPN1P18031 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN1P18031 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
PTPN1P18031 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTPN1P18031 MIR3180-1-201ENST00000580374 94 ntBASIC19.29■□□□□ 0.68
PTPN1P18031 MIR3180-3-201ENST00000584616 94 ntBASIC19.29■□□□□ 0.68
PTPN1P18031 AP002414.4-201ENST00000589764 1148 ntBASIC19.29■□□□□ 0.68
PTPN1P18031 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN1P18031 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN1P18031 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN1P18031 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
PTPN1P18031 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN1P18031 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PTPN1P18031 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PTPN1P18031 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN1P18031 KRT18P1-202ENST00000452408 1331 ntBASIC19.28■□□□□ 0.68
PTPN1P18031 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN1P18031 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN1P18031 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN1P18031 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN1P18031 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN1P18031 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN1P18031 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN1P18031 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN1P18031 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN1P18031 HCG4P8-203ENST00000443049 980 ntBASIC19.28■□□□□ 0.68
PTPN1P18031 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN1P18031 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN1P18031 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN1P18031 GUSBP12-201ENST00000513727 720 ntBASIC19.28■□□□□ 0.68
PTPN1P18031 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN1P18031 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PTPN1P18031 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.28■□□□□ 0.68
PTPN1P18031 AC092329.2-201ENST00000598402 547 ntBASIC19.28■□□□□ 0.68
PTPN1P18031 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.28■□□□□ 0.68
PTPN1P18031 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN1P18031 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN1P18031 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PTPN1P18031 LINC00602-201ENST00000629776 2065 ntBASIC19.28■□□□□ 0.68
PTPN1P18031 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN1P18031 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN1P18031 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PTPN1P18031 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN1P18031 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN1P18031 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN1P18031 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN1P18031 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PTPN1P18031 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN1P18031 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN1P18031 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN1P18031 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
PTPN1P18031 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PTPN1P18031 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN1P18031 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN1P18031 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.27■□□□□ 0.68
PTPN1P18031 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN1P18031 RN7SL606P-201ENST00000472779 293 ntBASIC19.27■□□□□ 0.68
PTPN1P18031 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPN1P18031 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.27■□□□□ 0.68
PTPN1P18031 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN1P18031 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PTPN1P18031 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN1P18031 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PTPN1P18031 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PTPN1P18031 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN1P18031 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN1P18031 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN1P18031 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.27■□□□□ 0.67
PTPN1P18031 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN1P18031 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN1P18031 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
PTPN1P18031 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PTPN1P18031 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PTPN1P18031 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN1P18031 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms