Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.27■□□□□ 0.84
SMPD1P17405 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD1P17405 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SMPD1P17405 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SMPD1P17405 ABCD1P5-201ENST00000445663 754 ntBASIC20.27■□□□□ 0.84
SMPD1P17405 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.27■□□□□ 0.84
SMPD1P17405 SART3-203ENST00000546611 1184 ntBASIC20.27■□□□□ 0.84
SMPD1P17405 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.27■□□□□ 0.84
SMPD1P17405 AC021087.4-201ENST00000563761 564 ntBASIC20.27■□□□□ 0.84
SMPD1P17405 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.27■□□□□ 0.84
SMPD1P17405 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD1P17405 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD1P17405 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD1P17405 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMPD1P17405 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMPD1P17405 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.27■□□□□ 0.83
SMPD1P17405 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.27■□□□□ 0.83
SMPD1P17405 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMPD1P17405 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SMPD1P17405 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMPD1P17405 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD1P17405 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.26■□□□□ 0.83
SMPD1P17405 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.26■□□□□ 0.83
SMPD1P17405 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.26■□□□□ 0.83
SMPD1P17405 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD1P17405 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.26■□□□□ 0.83
SMPD1P17405 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.26■□□□□ 0.83
SMPD1P17405 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD1P17405 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD1P17405 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
SMPD1P17405 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
SMPD1P17405 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD1P17405 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD1P17405 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.26■□□□□ 0.83
SMPD1P17405 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD1P17405 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD1P17405 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD1P17405 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD1P17405 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.25■□□□□ 0.83
SMPD1P17405 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.25■□□□□ 0.83
SMPD1P17405 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
SMPD1P17405 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD1P17405 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD1P17405 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD1P17405 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD1P17405 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.25■□□□□ 0.83
SMPD1P17405 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD1P17405 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD1P17405 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SMPD1P17405 KRT18P13-201ENST00000400056 1290 ntBASIC20.25■□□□□ 0.83
SMPD1P17405 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD1P17405 AC112698.1-201ENST00000510299 916 ntBASIC20.25■□□□□ 0.83
SMPD1P17405 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.25■□□□□ 0.83
SMPD1P17405 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD1P17405 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.25■□□□□ 0.83
SMPD1P17405 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.25■□□□□ 0.83
SMPD1P17405 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SMPD1P17405 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SMPD1P17405 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.24■□□□□ 0.83
SMPD1P17405 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.24■□□□□ 0.83
SMPD1P17405 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.24■□□□□ 0.83
SMPD1P17405 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.24■□□□□ 0.83
SMPD1P17405 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SMPD1P17405 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD1P17405 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.23■□□□□ 0.83
SMPD1P17405 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMPD1P17405 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
SMPD1P17405 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMPD1P17405 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMPD1P17405 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMPD1P17405 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMPD1P17405 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMPD1P17405 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.23■□□□□ 0.83
SMPD1P17405 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.23■□□□□ 0.83
SMPD1P17405 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SMPD1P17405 MIR940-201ENST00000401276 94 ntBASIC20.23■□□□□ 0.83
SMPD1P17405 RPS2P1-201ENST00000434010 821 ntBASIC20.23■□□□□ 0.83
SMPD1P17405 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SMPD1P17405 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMPD1P17405 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.23■□□□□ 0.83
SMPD1P17405 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.23■□□□□ 0.83
SMPD1P17405 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.23■□□□□ 0.83
SMPD1P17405 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMPD1P17405 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SMPD1P17405 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SMPD1P17405 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SMPD1P17405 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms