Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.17■□□□□ 0.66
RARAP10276 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.17■□□□□ 0.66
RARAP10276 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.17■□□□□ 0.66
RARAP10276 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 AC112497.1-201ENST00000624824 639 ntBASIC19.17■□□□□ 0.66
RARAP10276 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.17■□□□□ 0.66
RARAP10276 GNAS-203ENST00000306120 1878 ntBASIC19.17■□□□□ 0.66
RARAP10276 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.17■□□□□ 0.66
RARAP10276 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 LINC01568-207ENST00000641790 1380 ntBASIC19.17■□□□□ 0.66
RARAP10276 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.16■□□□□ 0.66
RARAP10276 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RARAP10276 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.16■□□□□ 0.66
RARAP10276 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RARAP10276 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
RARAP10276 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RARAP10276 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.16■□□□□ 0.66
RARAP10276 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RARAP10276 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.16■□□□□ 0.66
RARAP10276 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RARAP10276 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.16■□□□□ 0.66
RARAP10276 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RARAP10276 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.16■□□□□ 0.66
RARAP10276 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
RARAP10276 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.16■□□□□ 0.66
RARAP10276 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RARAP10276 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RARAP10276 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RARAP10276 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.16■□□□□ 0.66
RARAP10276 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RARAP10276 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RARAP10276 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RARAP10276 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RARAP10276 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.16■□□□□ 0.66
RARAP10276 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.15■□□□□ 0.66
RARAP10276 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.15■□□□□ 0.66
RARAP10276 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RARAP10276 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.15■□□□□ 0.66
RARAP10276 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RARAP10276 HMGA1P5-201ENST00000412453 271 ntBASIC19.15■□□□□ 0.66
RARAP10276 AC087499.1-201ENST00000418141 1075 ntBASIC19.15■□□□□ 0.66
RARAP10276 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.15■□□□□ 0.66
RARAP10276 AC104390.1-201ENST00000555663 520 ntBASIC19.15■□□□□ 0.66
RARAP10276 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.15■□□□□ 0.66
RARAP10276 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.15■□□□□ 0.66
RARAP10276 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
RARAP10276 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RARAP10276 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 AL096828.2-201ENST00000567259 1965 ntBASIC19.15■□□□□ 0.66
RARAP10276 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RARAP10276 AC009102.3-201ENST00000623118 1491 ntBASIC19.15■□□□□ 0.66
RARAP10276 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.15■□□□□ 0.66
RARAP10276 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RARAP10276 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RARAP10276 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RARAP10276 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
RARAP10276 AC012313.1-201ENST00000593393 3059 ntBASIC19.14■□□□□ 0.66
RARAP10276 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
RARAP10276 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RARAP10276 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RARAP10276 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.14■□□□□ 0.65
RARAP10276 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.14■□□□□ 0.65
RARAP10276 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 MIR149-201ENST00000384879 89 ntBASIC19.14■□□□□ 0.65
RARAP10276 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.14■□□□□ 0.65
RARAP10276 AC009947.2-201ENST00000444014 672 ntBASIC19.14■□□□□ 0.65
RARAP10276 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.14■□□□□ 0.65
RARAP10276 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.14■□□□□ 0.65
RARAP10276 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.14■□□□□ 0.65
RARAP10276 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.14■□□□□ 0.65
RARAP10276 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.14■□□□□ 0.65
RARAP10276 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.14■□□□□ 0.65
RARAP10276 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
RARAP10276 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.14■□□□□ 0.65
RARAP10276 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms