Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
MMP3P08254 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP3P08254 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.15■□□□□ 0.82
MMP3P08254 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
MMP3P08254 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP3P08254 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.15■□□□□ 0.82
MMP3P08254 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.15■□□□□ 0.82
MMP3P08254 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.15■□□□□ 0.82
MMP3P08254 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.15■□□□□ 0.82
MMP3P08254 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.15■□□□□ 0.82
MMP3P08254 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
MMP3P08254 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP3P08254 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.15■□□□□ 0.82
MMP3P08254 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
MMP3P08254 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP3P08254 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
MMP3P08254 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
MMP3P08254 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP3P08254 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
MMP3P08254 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
MMP3P08254 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP3P08254 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP3P08254 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP3P08254 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP3P08254 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP3P08254 MIR574-201ENST00000385209 96 ntBASIC20.14■□□□□ 0.81
MMP3P08254 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.14■□□□□ 0.81
MMP3P08254 AC112698.1-201ENST00000510299 916 ntBASIC20.14■□□□□ 0.81
MMP3P08254 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.14■□□□□ 0.81
MMP3P08254 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MMP3P08254 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.14■□□□□ 0.81
MMP3P08254 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.14■□□□□ 0.81
MMP3P08254 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.14■□□□□ 0.81
MMP3P08254 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
MMP3P08254 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.14■□□□□ 0.81
MMP3P08254 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
MMP3P08254 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP3P08254 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MMP3P08254 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP3P08254 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP3P08254 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP3P08254 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP3P08254 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.13■□□□□ 0.81
MMP3P08254 PMS2P1-201ENST00000431037 1228 ntBASIC20.13■□□□□ 0.81
MMP3P08254 HNRNPDP1-201ENST00000439535 754 ntBASIC20.13■□□□□ 0.81
MMP3P08254 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP3P08254 SCARNA2-201ENST00000458748 420 ntBASIC20.13■□□□□ 0.81
MMP3P08254 AC093909.1-201ENST00000504731 1122 ntBASIC20.13■□□□□ 0.81
MMP3P08254 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.13■□□□□ 0.81
MMP3P08254 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP3P08254 AC006538.3-201ENST00000612495 578 ntBASIC20.13■□□□□ 0.81
MMP3P08254 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP3P08254 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP3P08254 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP3P08254 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP3P08254 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP3P08254 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP3P08254 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.12■□□□□ 0.81
MMP3P08254 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.12■□□□□ 0.81
MMP3P08254 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.12■□□□□ 0.81
MMP3P08254 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP3P08254 AP005117.1-201ENST00000584346 1413 ntBASIC20.12■□□□□ 0.81
MMP3P08254 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP3P08254 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP3P08254 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP3P08254 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
MMP3P08254 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP3P08254 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP3P08254 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP3P08254 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP3P08254 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.12■□□□□ 0.81
MMP3P08254 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP3P08254 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP3P08254 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.12■□□□□ 0.81
MMP3P08254 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.12■□□□□ 0.81
MMP3P08254 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP3P08254 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP3P08254 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP3P08254 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP3P08254 GPALPP1-207ENST00000611650 899 ntBASIC20.12■□□□□ 0.81
MMP3P08254 FAM215A-202ENST00000632077 792 ntBASIC20.12■□□□□ 0.81
MMP3P08254 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP3P08254 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
MMP3P08254 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP3P08254 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms