Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA1P02708 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA1P02708 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA1P02708 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA1P02708 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNA1P02708 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.81■□□□□ 0.76
CHRNA1P02708 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNA1P02708 KRT18P65-201ENST00000439811 1286 ntBASIC19.81■□□□□ 0.76
CHRNA1P02708 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA1P02708 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.81■□□□□ 0.76
CHRNA1P02708 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNA1P02708 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRNA1P02708 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.81■□□□□ 0.76
CHRNA1P02708 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRNA1P02708 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CHRNA1P02708 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CHRNA1P02708 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CHRNA1P02708 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA1P02708 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRNA1P02708 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRNA1P02708 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA1P02708 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRNA1P02708 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA1P02708 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA1P02708 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA1P02708 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CHRNA1P02708 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA1P02708 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA1P02708 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CHRNA1P02708 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA1P02708 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA1P02708 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA1P02708 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHRNA1P02708 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.8■□□□□ 0.76
CHRNA1P02708 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
CHRNA1P02708 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CHRNA1P02708 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA1P02708 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA1P02708 MIR7706-201ENST00000613747 67 ntBASIC19.8■□□□□ 0.76
CHRNA1P02708 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.8■□□□□ 0.76
CHRNA1P02708 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA1P02708 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA1P02708 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA1P02708 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA1P02708 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHRNA1P02708 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA1P02708 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CHRNA1P02708 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.79■□□□□ 0.76
CHRNA1P02708 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA1P02708 AP005117.1-201ENST00000584346 1413 ntBASIC19.79■□□□□ 0.76
CHRNA1P02708 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHRNA1P02708 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA1P02708 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHRNA1P02708 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CHRNA1P02708 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA1P02708 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNA1P02708 PMS2P1-201ENST00000431037 1228 ntBASIC19.79■□□□□ 0.76
CHRNA1P02708 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.79■□□□□ 0.76
CHRNA1P02708 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.79■□□□□ 0.76
CHRNA1P02708 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNA1P02708 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHRNA1P02708 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA1P02708 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
CHRNA1P02708 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.79■□□□□ 0.76
CHRNA1P02708 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.79■□□□□ 0.76
CHRNA1P02708 FAM215A-202ENST00000632077 792 ntBASIC19.79■□□□□ 0.76
CHRNA1P02708 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.79■□□□□ 0.76
CHRNA1P02708 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNA1P02708 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CHRNA1P02708 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.79■□□□□ 0.76
CHRNA1P02708 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA1P02708 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA1P02708 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA1P02708 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
CHRNA1P02708 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA1P02708 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHRNA1P02708 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNA1P02708 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA1P02708 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA1P02708 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.78■□□□□ 0.76
CHRNA1P02708 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA1P02708 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA1P02708 SCARNA2-201ENST00000458748 420 ntBASIC19.78■□□□□ 0.76
CHRNA1P02708 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA1P02708 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA1P02708 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA1P02708 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNA1P02708 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNA1P02708 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA1P02708 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNA1P02708 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CHRNA1P02708 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CHRNA1P02708 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA1P02708 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA1P02708 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.77■□□□□ 0.76
CHRNA1P02708 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CHRNA1P02708 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.77■□□□□ 0.76
CHRNA1P02708 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.77■□□□□ 0.76
CHRNA1P02708 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.77■□□□□ 0.76
CHRNA1P02708 ANO7L1-203ENST00000602586 1720 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms