Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.3■□□□□ 0.04
SIX6O95475 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SIX6O95475 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SIX6O95475 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 GPX1P1-201ENST00000388829 606 ntBASIC15.3■□□□□ 0.04
SIX6O95475 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 KRT8P45-201ENST00000414328 1447 ntBASIC15.3■□□□□ 0.04
SIX6O95475 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.3■□□□□ 0.04
SIX6O95475 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.3■□□□□ 0.04
SIX6O95475 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.3■□□□□ 0.04
SIX6O95475 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.3■□□□□ 0.04
SIX6O95475 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SIX6O95475 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.3■□□□□ 0.04
SIX6O95475 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.3■□□□□ 0.04
SIX6O95475 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.3■□□□□ 0.04
SIX6O95475 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SIX6O95475 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.3■□□□□ 0.04
SIX6O95475 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.3■□□□□ 0.04
SIX6O95475 AL357033.4-201ENST00000617703 1807 ntBASIC15.3■□□□□ 0.04
SIX6O95475 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.3■□□□□ 0.04
SIX6O95475 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SIX6O95475 MST1L-201ENST00000442552 2185 ntBASIC15.29■□□□□ 0.04
SIX6O95475 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.29■□□□□ 0.04
SIX6O95475 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SIX6O95475 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.29■□□□□ 0.04
SIX6O95475 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.29■□□□□ 0.04
SIX6O95475 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.29■□□□□ 0.04
SIX6O95475 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.29■□□□□ 0.04
SIX6O95475 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SIX6O95475 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 PCDHA14-201ENST00000506751 2298 ntBASIC15.29■□□□□ 0.04
SIX6O95475 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 AC105020.1-201ENST00000435356 2205 ntBASIC15.29■□□□□ 0.04
SIX6O95475 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
SIX6O95475 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.29■□□□□ 0.04
SIX6O95475 CROCCP2-202ENST00000412962 2773 ntBASIC15.29■□□□□ 0.04
SIX6O95475 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SIX6O95475 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX6O95475 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SIX6O95475 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.28■□□□□ 0.04
SIX6O95475 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SIX6O95475 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SIX6O95475 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.28■□□□□ 0.04
SIX6O95475 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.28■□□□□ 0.04
SIX6O95475 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.28■□□□□ 0.04
SIX6O95475 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.28■□□□□ 0.04
SIX6O95475 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 LINC02199-201ENST00000506655 2702 ntBASIC15.28■□□□□ 0.04
SIX6O95475 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SIX6O95475 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SIX6O95475 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.28■□□□□ 0.04
SIX6O95475 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SIX6O95475 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.28■□□□□ 0.04
SIX6O95475 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIX6O95475 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms