Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM3O75382 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM3O75382 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM3O75382 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 AC090164.3-201ENST00000610780 2143 ntBASIC17.03■□□□□ 0.32
TRIM3O75382 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRIM3O75382 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRIM3O75382 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM3O75382 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM3O75382 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRIM3O75382 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM3O75382 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM3O75382 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM3O75382 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM3O75382 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM3O75382 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRIM3O75382 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM3O75382 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRIM3O75382 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
TRIM3O75382 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM3O75382 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM3O75382 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRIM3O75382 AC068880.1-201ENST00000507289 2297 ntBASIC17.03■□□□□ 0.32
TRIM3O75382 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRIM3O75382 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM3O75382 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
TRIM3O75382 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TRIM3O75382 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRIM3O75382 AL354751.1-201ENST00000412768 1863 ntBASIC17.02■□□□□ 0.32
TRIM3O75382 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM3O75382 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM3O75382 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM3O75382 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.02■□□□□ 0.32
TRIM3O75382 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.02■□□□□ 0.32
TRIM3O75382 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM3O75382 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.02■□□□□ 0.32
TRIM3O75382 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM3O75382 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TRIM3O75382 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM3O75382 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM3O75382 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIM3O75382 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM3O75382 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIM3O75382 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM3O75382 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM3O75382 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIM3O75382 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM3O75382 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
TRIM3O75382 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM3O75382 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM3O75382 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TRIM3O75382 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM3O75382 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM3O75382 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM3O75382 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM3O75382 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM3O75382 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRIM3O75382 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TRIM3O75382 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms